@prefix cl: .
@prefix cohsi: .
@prefix loinc: .
@prefix obo: .
@prefix skos: .
@prefix var: .
@prefix xsd: .
a skos:Concept ;
skos:exactMatch obo:NCIT_C53256 ;
skos:inScheme cl:AE_relationship ;
skos:notation "1" ;
skos:prefLabel "not related"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C53257 ;
skos:inScheme cl:AE_relationship ;
skos:notation "2" ;
skos:prefLabel "unlikely"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C53258 ;
skos:inScheme cl:AE_relationship ;
skos:notation "3" ;
skos:prefLabel "possible"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C53259 ;
skos:inScheme cl:AE_relationship ;
skos:notation "4" ;
skos:prefLabel "probable"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C53260 ;
skos:inScheme cl:AE_relationship ;
skos:notation "5" ;
skos:prefLabel "definitely"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C38288 ;
skos:inScheme cl:AE_route ;
skos:notation "1" ;
skos:prefLabel "oral"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C38291 ;
skos:inScheme cl:AE_route ;
skos:notation "2" ;
skos:prefLabel "parenteral"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C38295 ;
skos:inScheme cl:AE_route ;
skos:notation "3" ;
skos:prefLabel "rectal"@en .
a skos:Concept ;
skos:inScheme cl:AE_route ;
skos:notation "4" ;
skos:prefLabel "other"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C41338 ;
skos:inScheme cl:AE_severity ;
skos:notation "1" ;
skos:prefLabel "mild"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C41339 ;
skos:inScheme cl:AE_severity ;
skos:notation "2" ;
skos:prefLabel "moderate"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C41340 ;
skos:inScheme cl:AE_severity ;
skos:notation "3" ;
skos:prefLabel "severe"@en .
a skos:Concept ;
skos:inScheme cl:AE_treatment_required ;
skos:notation "0" ;
skos:prefLabel "none"@en .
a skos:Concept ;
skos:inScheme cl:AE_treatment_required ;
skos:notation "1" ;
skos:prefLabel "drug treatment"@en .
a skos:Concept ;
skos:inScheme cl:AE_treatment_required ;
skos:notation "2" ;
skos:prefLabel "other"@en .
a skos:Concept ;
skos:inScheme cl:CM_frequency ;
skos:notation "1" ;
skos:prefLabel "once"@en .
a skos:Concept ;
skos:inScheme cl:CM_frequency ;
skos:notation "2" ;
skos:prefLabel "more than once"@en .
a skos:Concept ;
skos:inScheme cl:Cerc ;
skos:notation "10" ;
skos:prefLabel "10"@en .
a skos:Concept ;
skos:inScheme cl:Cerc ;
skos:notation "20" ;
skos:prefLabel "20"@en .
a skos:Concept ;
skos:inScheme cl:Cerc ;
skos:notation "30" ;
skos:prefLabel "30"@en .
a skos:Concept ;
skos:inScheme cl:Cerc ;
skos:notation "45" ;
skos:prefLabel "45"@en .
a skos:Concept ;
skos:inScheme cl:Cerc ;
skos:notation "60" ;
skos:prefLabel "60"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "1" ;
skos:prefLabel "none"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "2" ;
skos:prefLabel "no meat and fish"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "3" ;
skos:prefLabel "meat, but no fish"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "4" ;
skos:prefLabel "fish, but no meat"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "5" ;
skos:prefLabel "vegan"@en .
a skos:Concept ;
skos:inScheme cl:Diet ;
skos:notation "6" ;
skos:prefLabel "other"@en .
a skos:Concept ;
skos:inScheme cl:Dose_PZQ ;
skos:notation "40" ;
skos:prefLabel "40 mg/kg"@en .
a skos:Concept ;
skos:inScheme cl:Dose_PZQ ;
skos:notation "60" ;
skos:prefLabel "60 mg/kg"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "0" ;
skos:prefLabel "<1:32"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "1" ;
skos:prefLabel "1:32"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "2" ;
skos:prefLabel "1:64"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "3" ;
skos:prefLabel "1:128"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "4" ;
skos:prefLabel "1:256"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "5" ;
skos:prefLabel "1:512"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "6" ;
skos:prefLabel "1:1024"@en .
a skos:Concept ;
skos:inScheme cl:ELISA_egg ;
skos:notation "7" ;
skos:prefLabel ">1024"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C20197 ;
skos:inScheme cl:Gender ;
skos:notation "0" ;
skos:prefLabel "male"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C16576 ;
skos:inScheme cl:Gender ;
skos:notation "1" ;
skos:prefLabel "female"@en .
a skos:Concept ;
skos:inScheme cl:Group ;
skos:notation "A10" ;
skos:prefLabel "A10"@en .
a skos:Concept ;
skos:inScheme cl:Group ;
skos:notation "A20" ;
skos:prefLabel "A20"@en .
a skos:Concept ;
skos:inScheme cl:Group ;
skos:notation "B20" ;
skos:prefLabel "B20"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "0" ;
skos:prefLabel "<1:16"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "1" ;
skos:prefLabel "1:16"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "2" ;
skos:prefLabel "1:32"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "3" ;
skos:prefLabel "1:64"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "4" ;
skos:prefLabel "1:128"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "5" ;
skos:prefLabel "1:256"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "6" ;
skos:prefLabel "1:512"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "7" ;
skos:prefLabel "1:1024"@en .
a skos:Concept ;
skos:inScheme cl:IFA_worm ;
skos:notation "8" ;
skos:prefLabel ">1:1024"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "1" ;
skos:prefLabel "AF"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "10" ;
skos:prefLabel "ESR"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "11" ;
skos:prefLabel "gGT"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "12" ;
skos:prefLabel "Glucose"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "13" ;
skos:prefLabel "Hematocrit"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "14" ;
skos:prefLabel "Hemoglobin"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "15" ;
skos:prefLabel "Leukocytes"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "16" ;
skos:prefLabel "Lymphocytes"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "17" ;
skos:prefLabel "MCH"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "18" ;
skos:prefLabel "MCHC"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "19" ;
skos:prefLabel "MCV"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "2" ;
skos:prefLabel "ALAT"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "20" ;
skos:prefLabel "Monocytes"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "21" ;
skos:prefLabel "Neutrophils"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "22" ;
skos:prefLabel "Potassium"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "23" ;
skos:prefLabel "Sodium"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "24" ;
skos:prefLabel "Trombocytes"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "3" ;
skos:prefLabel "ASAT"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "4" ;
skos:prefLabel "Basophils"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "5" ;
skos:prefLabel "Bilirubin total"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "6" ;
skos:prefLabel "BUN"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "7" ;
skos:prefLabel "Creatinine"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "8" ;
skos:prefLabel "Eosinophils"@en .
a skos:Concept ;
skos:inScheme cl:Lab_abnormalities ;
skos:notation "9" ;
skos:prefLabel "Erythocytes"@en .
a skos:Concept ;
skos:inScheme cl:Left_right ;
skos:notation "0" ;
skos:prefLabel "Left"@en .
a skos:Concept ;
skos:inScheme cl:Left_right ;
skos:notation "1" ;
skos:prefLabel "Right"@en .
a skos:Concept,
cohsi:MissingValue ;
skos:inScheme cl:Missing ;
skos:notation "-95" ;
skos:prefLabel "Measurement failed"@en .
a skos:Concept,
cohsi:MissingValue ;
skos:inScheme cl:Missing ;
skos:notation "-96" ;
skos:prefLabel "Not applicable"@en .
a skos:Concept,
cohsi:MissingValue ;
skos:inScheme cl:Missing ;
skos:notation "-97" ;
skos:prefLabel "Not asked"@en .
a skos:Concept,
cohsi:MissingValue ;
skos:inScheme cl:Missing ;
skos:notation "-98" ;
skos:prefLabel "Asked but unknown"@en .
a skos:Concept,
cohsi:MissingValue ;
skos:inScheme cl:Missing ;
skos:notation "-99" ;
skos:prefLabel "Not done"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "10" ;
skos:prefLabel "98-102 kg = 10 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "5" ;
skos:prefLabel "48-52 kg = 5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "5.5" ;
skos:prefLabel "53-57 kg = 5,5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "6" ;
skos:prefLabel "58-62 kg = 6 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "6.5" ;
skos:prefLabel "63-67 kg = 6,5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "7" ;
skos:prefLabel "68-72 kg = 7 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "7.5" ;
skos:prefLabel "73-77 kg = 7,5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "8" ;
skos:prefLabel "78-82 kg = 8 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "8.5" ;
skos:prefLabel "83-87 kg = 8,5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "9" ;
skos:prefLabel "88-92 kg = 9 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_60_mg_kg ;
skos:notation "9.5" ;
skos:prefLabel "93-97 kg = 9,5 tablets"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_dosing_schedule ;
skos:notation "1" ;
skos:prefLabel "60 mg/kg split over 2 doses in 24 hours for one day"@en .
a skos:Concept ;
skos:inScheme cl:PZQ_dosing_schedule ;
skos:notation "2" ;
skos:prefLabel "60 mg/kg split over 3 doses in 24 hours for three days"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C25247 ;
skos:inScheme cl:Pos_Neg ;
skos:notation "0" ;
skos:prefLabel "negative"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C25246 ;
skos:inScheme cl:Pos_Neg ;
skos:notation "1" ;
skos:prefLabel "positive"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C25247 ;
skos:inScheme cl:Pos_Neg_Not_done ;
skos:notation "0" ;
skos:prefLabel "negative"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C25246 ;
skos:inScheme cl:Pos_Neg_Not_done ;
skos:notation "1" ;
skos:prefLabel "positive"@en .
a skos:Concept ;
skos:inScheme cl:Pos_Neg_Not_done ;
skos:notation "2" ;
skos:prefLabel "not done"@en .
a skos:Concept ;
skos:inScheme cl:Pregnancy_test ;
skos:notation "0" ;
skos:prefLabel "not pregnant"@en .
a skos:Concept ;
skos:inScheme cl:Pregnancy_test ;
skos:notation "1" ;
skos:prefLabel "pregnant"@en .
a skos:Concept ;
skos:inScheme cl:SCAA_volume ;
skos:notation "0.5 mL" ;
skos:prefLabel "0.5 mL"@en .
a skos:Concept ;
skos:inScheme cl:SCAA_volume ;
skos:notation "2.0 mL" ;
skos:prefLabel "2.0 mL"@en .
a skos:Concept ;
skos:inScheme cl:Sediment ;
skos:notation "0" ;
skos:prefLabel "normal"@en .
a skos:Concept ;
skos:inScheme cl:Sediment ;
skos:notation "1" ;
skos:prefLabel "abnormal"@en .
a skos:Concept ;
skos:inScheme cl:Selection ;
skos:notation "0" ;
skos:prefLabel "not selected / excluded"@en .
a skos:Concept ;
skos:inScheme cl:Selection ;
skos:notation "1" ;
skos:prefLabel "selected"@en .
a skos:Concept ;
skos:inScheme cl:Selection ;
skos:notation "2" ;
skos:prefLabel "backup"@en .
a skos:Concept ;
skos:exactMatch obo:CHEBI_45267 ;
skos:inScheme cl:Treatment ;
skos:notation "1" ;
skos:prefLabel "Praziquantel"@en .
a skos:Concept ;
skos:closeMatch obo:CHEBI_156095,
obo:CHEBI_195280 ;
skos:inScheme cl:Treatment ;
skos:notation "2" ;
skos:prefLabel "Artemether/lumefantrine"@en .
a skos:Concept ;
skos:inScheme cl:UCAA_volume ;
skos:notation "2.0 mL" ;
skos:prefLabel "2.0 mL"@en .
a skos:Concept ;
skos:inScheme cl:UCAA_volume ;
skos:notation "4.0 mL" ;
skos:prefLabel "4.0 mL"@en .
a skos:Concept ;
skos:inScheme cl:UCAA_volume ;
skos:notation "7.5 mL" ;
skos:prefLabel "7.5 mL"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "other" ;
skos:prefLabel "other"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week00" ;
skos:prefLabel "week 00"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week01" ;
skos:prefLabel "week 01"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week02" ;
skos:prefLabel "week 02"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week03" ;
skos:prefLabel "week 03"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week04" ;
skos:prefLabel "week 04"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week05" ;
skos:prefLabel "week 05"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week06" ;
skos:prefLabel "week 06"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week07" ;
skos:prefLabel "week 07"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week08" ;
skos:prefLabel "week 08"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week09" ;
skos:prefLabel "week 09"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week10" ;
skos:prefLabel "week 10"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week11" ;
skos:prefLabel "week 11"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week12" ;
skos:prefLabel "week 12"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week13" ;
skos:prefLabel "week 13"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week14" ;
skos:prefLabel "week 14"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week15" ;
skos:prefLabel "week 15"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week16" ;
skos:prefLabel "week 16"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week18" ;
skos:prefLabel "week 18"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week20" ;
skos:prefLabel "week 20"@en .
a skos:Concept ;
skos:inScheme cl:Visit ;
skos:notation "week52" ;
skos:prefLabel "week 52"@en .
a skos:Concept ;
skos:inScheme cl:Yes_Missing ;
skos:notation "missing" ;
skos:prefLabel "yes, but missing timepoint"@en .
a skos:Concept ;
skos:inScheme cl:Yes_Missing ;
skos:notation "treated" ;
skos:prefLabel "no, treated previously or lost to follow up"@en .
a skos:Concept ;
skos:inScheme cl:Yes_Missing ;
skos:notation "yes" ;
skos:prefLabel "yes"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C49487 ;
skos:inScheme cl:Yes_No ;
skos:notation "0" ;
skos:prefLabel "no"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C49488 ;
skos:inScheme cl:Yes_No ;
skos:notation "1" ;
skos:prefLabel "yes"@en .
a skos:Concept ;
skos:inScheme cl:ethnicity ;
skos:notation "1" ;
skos:prefLabel "Caucasian"@en .
a skos:Concept ;
skos:inScheme cl:ethnicity ;
skos:notation "2" ;
skos:prefLabel "Black"@en .
a skos:Concept ;
skos:inScheme cl:ethnicity ;
skos:notation "3" ;
skos:prefLabel "Asian"@en .
a skos:Concept ;
skos:inScheme cl:ethnicity ;
skos:notation "4" ;
skos:prefLabel "Mixed"@en .
a skos:Concept ;
skos:inScheme cl:ethnicity ;
skos:notation "8" ;
skos:prefLabel "Other"@en .
a skos:Concept ;
skos:inScheme cl:past_current ;
skos:notation "current" ;
skos:prefLabel "current"@en .
a skos:Concept ;
skos:inScheme cl:past_current ;
skos:notation "past" ;
skos:prefLabel "past"@en .
a skos:Concept ;
skos:inScheme cl:smoking ;
skos:notation "0" ;
skos:prefLabel "no"@en .
a skos:Concept ;
skos:inScheme cl:smoking ;
skos:notation "1" ;
skos:prefLabel "occasionally"@en .
a skos:Concept ;
skos:inScheme cl:smoking ;
skos:notation "2" ;
skos:prefLabel "daily"@en .
a skos:Concept ;
skos:inScheme cl:smoking_amount ;
skos:notation "1" ;
skos:prefLabel "≤ 10 daily"@en .
a skos:Concept ;
skos:inScheme cl:smoking_amount ;
skos:notation "2" ;
skos:prefLabel "11 - 20 daily"@en .
a skos:Concept ;
skos:inScheme cl:smoking_amount ;
skos:notation "3" ;
skos:prefLabel "21 - 40 daily"@en .
a skos:Concept ;
skos:inScheme cl:smoking_amount ;
skos:notation "4" ;
skos:prefLabel "> 40 daily"@en .
var:AE_ICD10 a cohsi:Variable ;
skos:altLabel "ICD-10 code"@en ;
skos:notation "AE_ICD10" ;
skos:prefLabel "AE ICD-10 code (version:2010)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "string" ;
cohsi:form "AE" .
var:AE_SAE a cohsi:Variable ;
skos:altLabel "Serious Adverse Event"@en ;
skos:notation "AE_SAE" ;
skos:prefLabel "AE serious"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:Yes_No .
var:AE_description a cohsi:Variable ;
skos:altLabel "Description of event"@en ;
skos:notation "AE_description" ;
skos:prefLabel "AE description"@en ;
cohsi:fairCore true ;
cohsi:fieldType "string" ;
cohsi:form "AE" .
var:AE_end_date a cohsi:Variable ;
skos:altLabel "End of event date"@en ;
skos:notation "AE_end_date" ;
skos:prefLabel "AE end date"@en ;
cohsi:fairCore true ;
cohsi:fieldType "date" ;
cohsi:form "AE" .
var:AE_end_time a cohsi:Variable ;
skos:altLabel "End of event time"@en ;
skos:notation "AE_end_time" ;
skos:prefLabel "AE end time"@en ;
cohsi:fairCore true ;
cohsi:fieldType "time" ;
cohsi:form "AE" .
var:AE_onset_date a cohsi:Variable ;
skos:altLabel "Onset of event date"@en ;
skos:notation "AE_onset_date" ;
skos:prefLabel "AE onset date"@en ;
cohsi:fairCore true ;
cohsi:fieldType "date" ;
cohsi:form "AE" .
var:AE_onset_time a cohsi:Variable ;
skos:altLabel "Onset of event time"@en ;
skos:notation "AE_onset_time" ;
skos:prefLabel "AE onset time"@en ;
cohsi:fairCore true ;
cohsi:fieldType "time" ;
cohsi:form "AE" .
var:AE_recovered a cohsi:Variable ;
skos:notation "AE_recovered" ;
skos:prefLabel "AE recovered (! leave empty if not recovered !)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:Yes_No .
var:AE_relation a cohsi:Variable ;
skos:altLabel "Relationship to CoHSI"@en ;
skos:notation "AE_relation" ;
skos:prefLabel "AE relationship to CoHSI"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:AE_relationship .
var:AE_remarks a cohsi:Variable ;
skos:altLabel "Remarks"@en ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "AE_remarks" ;
skos:prefLabel "AE remarks"@en ;
cohsi:fairCore true ;
cohsi:fieldType "textarea" ;
cohsi:form "AE" .
var:AE_serious a cohsi:Variable ;
skos:closeMatch obo:NCIT_C41335 ;
skos:notation "AE_serious" ;
skos:prefLabel "Serious adverse event"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:AE_severity a cohsi:Variable ;
skos:altLabel "Severity of event"@en ;
skos:notation "AE_severity" ;
skos:prefLabel "AE severity"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:AE_severity .
var:AE_solicited a cohsi:Variable ;
skos:closeMatch obo:NCIT_C179175 ;
skos:notation "AE_solicited" ;
skos:prefLabel "Solicited adverse events"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:AE_solicited_which.abdominal_pain a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C26682 ;
skos:notation "AE_solicited_which#abdominal_pain" ;
skos:prefLabel "Solicited adverse events: abdominal pain"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.anorexia a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C2875 ;
skos:notation "AE_solicited_which#anorexia" ;
skos:prefLabel "Solicited adverse events: anorexia"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.arthralgia a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C50464 ;
skos:notation "AE_solicited_which#arthralgia" ;
skos:prefLabel "Solicited adverse events: arthralgia"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.back_pain a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C41830 ;
skos:notation "AE_solicited_which#back_pain" ;
skos:prefLabel "Solicited adverse events: back pain"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.coughing a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C37935 ;
skos:notation "AE_solicited_which#coughing" ;
skos:prefLabel "Solicited adverse events: coughing"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.diarrhea a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C2987 ;
skos:notation "AE_solicited_which#diarrhea" ;
skos:prefLabel "Solicited adverse events: diarrhea"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.fatigue a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3036 ;
skos:notation "AE_solicited_which#fatigue" ;
skos:prefLabel "Solicited adverse events: fatigue"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.fever_by_examination a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3038 ;
skos:notation "AE_solicited_which#fever_by_examination" ;
skos:prefLabel "Solicited adverse events: fever by examination"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.headache a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C34661 ;
skos:notation "AE_solicited_which#headache" ;
skos:prefLabel "Solicited adverse events: headache"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.itching a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3344 ;
skos:notation "AE_solicited_which#itching" ;
skos:prefLabel "Solicited adverse events: itching"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.malaise a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3832 ;
skos:notation "AE_solicited_which#malaise" ;
skos:prefLabel "Solicited adverse events: malaise"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.myalgia a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C27009 ;
skos:notation "AE_solicited_which#myalgia" ;
skos:prefLabel "Solicited adverse events: myalgia"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.nausea a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3258 ;
skos:notation "AE_solicited_which#nausea" ;
skos:prefLabel "Solicited adverse events: nausea"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.night_sweats a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3279 ;
skos:notation "AE_solicited_which#night_sweats" ;
skos:prefLabel "Solicited adverse events: night sweats"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.rash a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C39594 ;
skos:notation "AE_solicited_which#rash" ;
skos:prefLabel "Solicited adverse events: rash"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.urticaria a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3432 ;
skos:notation "AE_solicited_which#urticaria" ;
skos:prefLabel "Solicited adverse events: urticaria"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_solicited_which.vomiting a cohsi:Variable ;
skos:broader var:AE_solicited_which ;
skos:closeMatch obo:NCIT_C3442 ;
skos:notation "AE_solicited_which#vomiting" ;
skos:prefLabel "Solicited adverse events: vomiting"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:AE_treatment a cohsi:Variable ;
skos:altLabel "Treatment required"@en ;
skos:notation "AE_treatment" ;
skos:prefLabel "AE required treatment"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:AE_treatment_required .
var:AE_treatment_other a cohsi:Variable ;
skos:notation "AE_treatment_other" ;
skos:prefLabel "Specify other treatment"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "AE" .
var:AE_unsolicited a cohsi:Variable ;
skos:closeMatch obo:NCIT_C179176 ;
skos:notation "AE_unsolicited" ;
skos:prefLabel "Unsolicited adverse events"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:AE_visit a cohsi:Variable ;
skos:altLabel "Registration visit"@en ;
skos:notation "AE_visit" ;
skos:prefLabel "AE registration visit"@en ;
cohsi:fairCore true ;
cohsi:fieldType "dropdown" ;
cohsi:form "AE" ;
cohsi:optionGroup cl:Visit .
var:ALAT a cohsi:Variable ;
skos:altLabel "ALAT"@en ;
skos:closeMatch loinc:1742-6 ;
skos:exactMatch obo:NCIT_C64433 ;
skos:notation "ALAT" ;
skos:prefLabel "Alanine transaminase (U/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:ALAT_female a cohsi:Variable ;
skos:closeMatch loinc:1742-6 ;
skos:exactMatch obo:NCIT_C64433 ;
skos:notation "ALAT_female" ;
skos:prefLabel "ALAT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:ALAT_male a cohsi:Variable ;
skos:closeMatch loinc:1742-6 ;
skos:exactMatch obo:NCIT_C64433 ;
skos:notation "ALAT_male" ;
skos:prefLabel "ALAT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:APh a cohsi:Variable ;
skos:altLabel "Alkaline phosphatase"@en ;
skos:closeMatch loinc:6768-6 ;
skos:exactMatch obo:NCIT_C64432 ;
skos:notation "APh" ;
skos:prefLabel "Alkaline phosphatase (U/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:APh_female a cohsi:Variable ;
skos:closeMatch loinc:6768-6 ;
skos:exactMatch obo:NCIT_C64432 ;
skos:notation "APh_female" ;
skos:prefLabel "Alkaline phosphatase (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:APh_male a cohsi:Variable ;
skos:closeMatch loinc:6768-6 ;
skos:exactMatch obo:NCIT_C64432 ;
skos:notation "APh_male" ;
skos:prefLabel "Alkaline phosphatase (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:ASAT a cohsi:Variable ;
skos:altLabel "ASAT"@en ;
skos:closeMatch loinc:1920-8 ;
skos:exactMatch obo:NCIT_C64467 ;
skos:notation "ASAT" ;
skos:prefLabel "Aspartate aminotransferase (U/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:ASAT_female a cohsi:Variable ;
skos:closeMatch loinc:1920-8 ;
skos:exactMatch obo:NCIT_C64467 ;
skos:notation "ASAT_female" ;
skos:prefLabel "ASAT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:ASAT_male a cohsi:Variable ;
skos:closeMatch loinc:1920-8 ;
skos:exactMatch obo:NCIT_C64467 ;
skos:notation "ASAT_male" ;
skos:prefLabel "ASAT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:AbnormalityLab a cohsi:Variable ;
skos:notation "AbnormalityLab" ;
skos:prefLabel "Is there any abnormality (other than eosinophils) of above mentioned lab measurements?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:AbnormalityLabWhich a cohsi:Variable ;
skos:notation "AbnormalityLabWhich" ;
skos:prefLabel "Which lab measurement is abnormal?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "grid" ;
cohsi:form "week X" .
var:AbnormalityLabWhich_Abnormality_1_Clinically_relevant a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_1__Clinically_relevant?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 1 Clinically relevant?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_1_Which_measurement a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_1_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 1 Which measurement?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_2_Clinically_relevant a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_2__Clinically_relevant?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 2 Clinically relevant?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_2_Which_measurement a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_2_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 2 Which measurement?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_3_Clinically_relevant a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_3__Clinically_relevant?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 3 Clinically relevant?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_3_Which_measurement a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_3_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 3 Which measurement?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_4_Clinically_relevant a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_4__Clinically_relevant?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 4 Clinically relevant?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_4_Which_measurement a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_4_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 4 Which measurement?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_5_Clinically_relevant a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_5__Clinically_relevant?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 5 Clinically relevant?"@en ;
cohsi:fairCore false .
var:AbnormalityLabWhich_Abnormality_5_Which_measurement a cohsi:Variable ;
skos:notation "AbnormalityLabWhich_Abnormality_5_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "AbnormalityLabWhich Abnormality 5 Which measurement?"@en ;
cohsi:fairCore false .
var:AbnormalityLab_ClinRel a cohsi:Variable ;
skos:notation "AbnormalityLab_ClinRel" ;
skos:prefLabel "Any clinically relevant abnormalities?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:Alcohol a cohsi:Variable ;
skos:notation "Alcohol" ;
skos:prefLabel "Alcohol"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:smoking .
var:Alcohol_units a cohsi:Variable ;
skos:notation "Alcohol_units" ;
skos:prefLabel "Alcohol: average units/week"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:Allergies a cohsi:Variable ;
skos:notation "Allergies" ;
skos:prefLabel "Any allergies"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Allergies_which a cohsi:Variable ;
skos:notation "Allergies_which" ;
skos:prefLabel "Specify allergies"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:AntibioticsBefore a cohsi:Variable ;
skos:notation "AntibioticsBefore" ;
skos:prefLabel "Use of antibiotic use 3 months before start of the study"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:AntibioticsBeforeExplain a cohsi:Variable ;
skos:notation "AntibioticsBeforeExplain" ;
skos:prefLabel "Please elaborate on AB-use"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:BP_diasystolic a cohsi:Variable ;
skos:closeMatch loinc:8462-4 ;
skos:exactMatch obo:NCIT_C25299 ;
skos:notation "BP_diasystolic" ;
skos:prefLabel "Diastolic blood pressure"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Physical examination" ;
cohsi:unit obo:UO_0000272 ;
cohsi:unitUCUM "mm[Hg]" .
var:BP_systolic a cohsi:Variable ;
skos:closeMatch loinc:8480-6 ;
skos:exactMatch obo:NCIT_C25298 ;
skos:notation "BP_systolic" ;
skos:prefLabel "Systolic blood pressure"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Physical examination" ;
cohsi:unit obo:UO_0000272 ;
cohsi:unitUCUM "mm[Hg]" .
var:BUN a cohsi:Variable ;
skos:altLabel "BUN"@en ;
skos:closeMatch loinc:22664-7 ;
skos:exactMatch obo:NCIT_C61019 ;
skos:notation "BUN" ;
skos:prefLabel "Blood urea nitrogen (mmol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:Basophils a cohsi:Variable ;
skos:altLabel "Basophils"@en ;
skos:closeMatch loinc:704-7 ;
skos:notation "Basophils" ;
skos:prefLabel "Basophils (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:Bilirubin a cohsi:Variable ;
skos:altLabel "Bilirubin total"@en ;
skos:closeMatch loinc:14631-6 ;
skos:exactMatch obo:NCIT_C38037 ;
skos:notation "Bilirubin" ;
skos:prefLabel "Bilirubin total (umol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:CM_dose a cohsi:Variable ;
skos:notation "CM_dose" ;
skos:prefLabel "Dose & units"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "CM" .
var:CM_frequency a cohsi:Variable ;
skos:notation "CM_frequency" ;
skos:prefLabel "Frequency, explain more than once"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "CM" .
var:CM_frequencyonce a cohsi:Variable ;
skos:notation "CM_frequencyonce" ;
skos:prefLabel "Frequency"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "CM" ;
cohsi:optionGroup cl:CM_frequency .
var:CM_indication a cohsi:Variable ;
skos:notation "CM_indication" ;
skos:prefLabel "Indication"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "CM" .
var:CM_indication_enddate a cohsi:Variable ;
skos:notation "CM_indication_enddate" ;
skos:prefLabel "Date ended"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "CM" .
var:CM_indication_endtime a cohsi:Variable ;
skos:notation "CM_indication_endtime" ;
skos:prefLabel "Time ended"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "CM" .
var:CM_indication_startdate a cohsi:Variable ;
skos:notation "CM_indication_startdate" ;
skos:prefLabel "Date started"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "CM" .
var:CM_indication_starttime a cohsi:Variable ;
skos:notation "CM_indication_starttime" ;
skos:prefLabel "Time started"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "CM" .
var:CM_medication a cohsi:Variable ;
skos:notation "CM_medication" ;
skos:prefLabel "Medication"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "CM" .
var:CM_remarks a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "CM_remarks" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "CM" .
var:CM_route a cohsi:Variable ;
skos:notation "CM_route" ;
skos:prefLabel "Route"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "CM" ;
cohsi:optionGroup cl:AE_route .
var:CM_route_other a cohsi:Variable ;
skos:notation "CM_route_other" ;
skos:prefLabel "Specify other route"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "CM" .
var:CM_visit a cohsi:Variable ;
skos:notation "CM_visit" ;
skos:prefLabel "Registration visit"@en ;
cohsi:fairCore false ;
cohsi:fieldType "dropdown" ;
cohsi:form "CM" ;
cohsi:optionGroup cl:Visit .
var:CoHSI a cohsi:Variable ;
skos:notation "CoHSI" ;
skos:prefLabel "CoHSI performed"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:CoHSI_00min a cohsi:Variable ;
skos:notation "CoHSI_00min" ;
skos:prefLabel "Inoculation site: 00 min"@en ;
cohsi:fairCore false ;
cohsi:fieldType "upload" ;
cohsi:form "CoHSI" .
var:CoHSI_30min a cohsi:Variable ;
skos:notation "CoHSI_30min" ;
skos:prefLabel "Inoculation site: 30 min"@en ;
cohsi:fairCore false ;
cohsi:fieldType "upload" ;
cohsi:form "CoHSI" .
var:CoHSI_cerc a cohsi:Variable ;
skos:altLabel "Number of cercariae"@en ;
skos:notation "CoHSI_cerc" ;
skos:prefLabel "Number of female Schistosoma mansoni cercariae"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "CoHSI" ;
cohsi:optionGroup cl:Cerc .
var:CoHSI_date a cohsi:Variable ;
skos:altLabel "Date CoHSI"@en ;
skos:notation "CoHSI_date" ;
skos:prefLabel "Date of CoHSI"@en ;
cohsi:fairCore true ;
cohsi:fieldType "date" ;
cohsi:form "CoHSI" .
var:CoHSI_form a cohsi:Variable ;
skos:notation "CoHSI_form" ;
skos:prefLabel "Upload CoHSI form (name: \"CoHSI form CS2-xxx\")"@en ;
cohsi:fairCore false ;
cohsi:fieldType "upload" ;
cohsi:form "CoHSI" .
var:CoHSI_group a cohsi:Variable ;
skos:notation "CoHSI_group" ;
skos:prefLabel "Group"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "CoHSI" ;
cohsi:optionGroup cl:Group .
var:CoHSI_not a cohsi:Variable ;
skos:notation "CoHSI_not" ;
skos:prefLabel "Why is CoHSI not performed?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "week X" .
var:CoHSI_performed a cohsi:Variable ;
skos:notation "CoHSI_performed" ;
skos:prefLabel "CoHSI performed"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Screening" ;
cohsi:optionGroup cl:Yes_No .
var:CoHSI_remarks a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "CoHSI_remarks" ;
skos:prefLabel "Remarks on CoHSI"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "CoHSI" .
var:CoHSI_snail a cohsi:Variable ;
skos:notation "CoHSI_snail" ;
skos:prefLabel "Snail ID"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "CoHSI" .
var:CoHSI_time a cohsi:Variable ;
skos:notation "CoHSI_time" ;
skos:prefLabel "Time start CoHSI"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "CoHSI" .
var:Conditions_week0 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C54056 ;
skos:notation "Conditions_week0" ;
skos:prefLabel "Any pre-existing conditions at week 0 (different than screening)?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:Creatinine a cohsi:Variable ;
skos:altLabel "Creatinine"@en ;
skos:closeMatch loinc:14682-9 ;
skos:exactMatch obo:NCIT_C64547 ;
skos:notation "Creatinine" ;
skos:prefLabel "Creatinine (umol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:Creatinine_female a cohsi:Variable ;
skos:closeMatch loinc:14682-9 ;
skos:exactMatch obo:NCIT_C64547 ;
skos:notation "Creatinine_female" ;
skos:prefLabel "Creatinine (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:Creatinine_male a cohsi:Variable ;
skos:closeMatch loinc:14682-9 ;
skos:exactMatch obo:NCIT_C64547 ;
skos:notation "Creatinine_male" ;
skos:prefLabel "Creatinine (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:Date a cohsi:Variable ;
skos:notation "Date" ;
skos:prefLabel "Date of visit"@en ;
cohsi:fairCore true ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Date_challenge a cohsi:Variable ;
skos:notation "Date_challenge" ;
skos:prefLabel "Date of challenge"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Diet a cohsi:Variable ;
skos:closeMatch obo:NCIT_C15222 ;
skos:notation "Diet" ;
skos:prefLabel "Diet"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Diet .
var:DietRemarks a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "DietRemarks" ;
skos:prefLabel "Remarks on diet"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:ESR a cohsi:Variable ;
skos:altLabel "ESR"@en ;
skos:closeMatch loinc:30341-2 ;
skos:exactMatch obo:NCIT_C74611 ;
skos:notation "ESR" ;
skos:prefLabel "Erythrocyte sedimentation rate (mm)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unitUCUM "mm/h" .
var:ESR_female a cohsi:Variable ;
skos:closeMatch loinc:30341-2 ;
skos:exactMatch obo:NCIT_C74611 ;
skos:notation "ESR_female" ;
skos:prefLabel "ESR (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "mm/h" .
var:ESR_male a cohsi:Variable ;
skos:closeMatch loinc:30341-2 ;
skos:exactMatch obo:NCIT_C74611 ;
skos:notation "ESR_male" ;
skos:prefLabel "ESR (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "mm/h" .
var:Egg_ELISA a cohsi:Variable ;
skos:altLabel "Schisto: ELISA egg"@en ;
skos:closeMatch obo:NCIT_C16553 ;
skos:notation "Egg_ELISA" ;
skos:prefLabel "Schistosomiasis: ELISA egg (IgG)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:ELISA_egg .
var:Eosinophils a cohsi:Variable ;
skos:altLabel "Eosinophils"@en ;
skos:closeMatch loinc:711-2 ;
skos:exactMatch obo:NCIT_C64550 ;
skos:notation "Eosinophils" ;
skos:prefLabel "Eosinophils (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:Examination_description a cohsi:Variable ;
skos:notation "Examination_description" ;
skos:prefLabel "Description physical examination"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Physical examination" .
var:Examination_signs a cohsi:Variable ;
skos:closeMatch obo:NCIT_C20989 ;
skos:notation "Examination_signs" ;
skos:prefLabel "Any signs during physical examination?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_OK_female a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_OK_female" ;
skos:prefLabel "Exclusion criteria OK"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:Excl_OK_male a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_OK_male" ;
skos:prefLabel "Exclusion criteria OK"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:Excl_contra a cohsi:Variable ;
skos:altLabel "Known hypersensitivity to or contra-indications (including co-medication) for use of praziquantel, artesunate or lumefantrine"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_contra" ;
skos:prefLabel "Exclusion criterium 6: Known hypersensitivity to or contra-indications (including co-medication) for use of praziquantel, artesunate or lumefantrine."@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_druginteraction a cohsi:Variable ;
skos:altLabel "Chronic use of any drug known to interact with praziquantel, artesunate or lumefantrine metabolism"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_druginteraction" ;
skos:prefLabel "Exclusion criterium 2: Chronic use of any drug known to interact with praziquantel, artesunate or lumefantrine metabolism (e.g. phenytoïn, carbamazepine, phenobarbital, primidon, dexamethason, rifampicine, cimetidine, flecaïnide, metoprolol, imipramine, amitriptyline, clomipramine, class IA and III anti-arrythmics, antipsychotics, antidepressants, macrolides, fluorchinolones, imidazole- and triazole antimycotics, antihistamines) Because lumefantrine may cause extension of QT-time, chronic use of drugs with effect on QT interval are excluded from the study."@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_ok a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_ok" ;
skos:prefLabel "Subject meets all exclusion criteria"@en ;
cohsi:fairCore true ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_para a cohsi:Variable ;
skos:altLabel "Being an employee or student of the department of parasitology or infectious diseases of the LUMC"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_para" ;
skos:prefLabel "Exclusion criterium 7: Being an employee or student of the department of parasitology or infectious diseases of the LUMC."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_pregnancy a cohsi:Variable ;
skos:altLabel "Positive urine pregnancy test at screening"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_pregnancy" ;
skos:prefLabel "Exclusion criterium 3: Positive urine pregnancy test at screening."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_schisto_history a cohsi:Variable ;
skos:altLabel "Any history of schistosomiasis or treatment for schistosomiasis"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_schisto_history" ;
skos:prefLabel "Exclusion criterium 4: Any history of schistosomiasis or treatment for schistosomiasis."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_schisto_test a cohsi:Variable ;
skos:altLabel "Positive serology for schistosomiasis or elevated serum CAA at baseline"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_schisto_test" ;
skos:prefLabel "Exclusion criterium 5: Positive serology for schistosomiasis or elevated serum CAA at baseline."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Excl_symptoms a cohsi:Variable ;
skos:altLabel "Any history, or evidence at screening, of clinically significant symptoms, physical signs or abnormal laboratory values suggestive of systemic conditions, such as cardiovascular, pulmonary, renal, hepatic, neurological, dermatological, endocrine, malignant, haematological, infectious, immune-deficient, psychiatric and other disorders, which could compromise the health of the volunteer during the study or interfere with the interpretation of the study results"@en ;
skos:closeMatch obo:NCIT_C25370 ;
skos:notation "Excl_symptoms" ;
skos:prefLabel """Exclusion criterium 1: Any history, or evidence at screening, of clinically significant symptoms, physical signs or abnormal laboratory values suggestive of systemic conditions, such as cardiovascular, pulmonary, renal, hepatic, neurological, dermatological, endocrine, malignant, haematological, infectious, immune-deficient, psychiatric and other disorders, which could compromise the health of the volunteer during the study or interfere with the interpretation of the study results. These include, but are not limited to, any of the following:
- body weight <50 kg or Body Mass Index (BMI) <18.0 or >30.0 kg/m2 at screening;
- positive HIV, HBV or HCV screening tests;
- the use of immune modifying drugs within three months prior to study onset (inhaled and topical corticosteroids and oral anti-histamines exempted) or expected use of such during the study period;
- history of malignancy of any organ system (other than localized basal cell carcinoma of the skin), treated or untreated, within the past 5 years;
- any history of treatment for severe psychiatric disease by a psychiatrist in the past year;
- history of drug or alcohol abuse interfering with normal social function in the period of one year prior to study onset."""@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Feces_Bristol a cohsi:Variable ;
skos:closeMatch obo:NCIT_C125393 ;
skos:notation "Feces_Bristol" ;
skos:prefLabel "Bristol Stool Scale"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" .
var:Feces_CDate a cohsi:Variable ;
skos:notation "Feces_CDate" ;
skos:prefLabel "Feces collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Feces_CTime a cohsi:Variable ;
skos:notation "Feces_CTime" ;
skos:prefLabel "Feces collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Feces_Fridge a cohsi:Variable ;
skos:notation "Feces_Fridge" ;
skos:prefLabel "Stored in fridge between collection and delivery LUMC?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:Gender a cohsi:Variable ;
skos:exactMatch obo:NCIT_C17357 ;
skos:notation "Gender" ;
skos:prefLabel "Gender"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" .
var:Glucose a cohsi:Variable ;
skos:altLabel "Glucose (serum)"@en ;
skos:closeMatch loinc:14749-6 ;
skos:exactMatch obo:NCIT_C105585 ;
skos:notation "Glucose" ;
skos:prefLabel "Serum glucose (mmol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:Hematocrit a cohsi:Variable ;
skos:altLabel "Hematocrit"@en ;
skos:closeMatch loinc:20570-8 ;
skos:exactMatch obo:NCIT_C64796 ;
skos:notation "Hematocrit" ;
skos:prefLabel "Hematocrit (L/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unitUCUM "L/L" .
var:Hematocrit_female a cohsi:Variable ;
skos:closeMatch loinc:20570-8 ;
skos:exactMatch obo:NCIT_C64796 ;
skos:notation "Hematocrit_female" ;
skos:prefLabel "Hematocrit (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "L/L" .
var:Hematocrit_male a cohsi:Variable ;
skos:closeMatch loinc:20570-8 ;
skos:exactMatch obo:NCIT_C64796 ;
skos:notation "Hematocrit_male" ;
skos:prefLabel "Hematocrit (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "L/L" .
var:Hemoglobin a cohsi:Variable ;
skos:altLabel "Hemoglobin"@en ;
skos:closeMatch loinc:59260-0 ;
skos:exactMatch obo:NCIT_C64848 ;
skos:notation "Hemoglobin" ;
skos:prefLabel "Hemoglobin (mmol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:Hemoglobin_female a cohsi:Variable ;
skos:closeMatch loinc:59260-0 ;
skos:exactMatch obo:NCIT_C64848 ;
skos:notation "Hemoglobin_female" ;
skos:prefLabel "Hemoglobin (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:Hemoglobin_male a cohsi:Variable ;
skos:closeMatch loinc:59260-0 ;
skos:exactMatch obo:NCIT_C64848 ;
skos:notation "Hemoglobin_male" ;
skos:prefLabel "Hemoglobin (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:Incl_Europe a cohsi:Variable ;
skos:altLabel "Subject will remain in Europe (excluding Corsica) during the study period and is reachable by mobile telephone from week 3 to week 8 of the study period"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_Europe" ;
skos:prefLabel "Inclusion criterium 4: Subject will remain in Europe (excluding Corsica) during the study period and is reachable by mobile telephone from week 3 to week 8 of the study period."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_OK_female a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_OK_female" ;
skos:prefLabel "Inclusion criteria OK"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:Incl_OK_male a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_OK_male" ;
skos:prefLabel "Inclusion criteria OK"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:Incl_Sanquin a cohsi:Variable ;
skos:altLabel "Subject agrees to refrain from blood donation to Sanquin or for other purposes throughout the study period"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_Sanquin" ;
skos:prefLabel "Inclusion criterium 5: Subject agrees to refrain from blood donation to Sanquin or for other purposes throughout the study period."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_age a cohsi:Variable ;
skos:altLabel "Subject is aged ≥ 18 and ≤ 45 years and in good health"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_age" ;
skos:prefLabel "Inclusion criterium 1: Subject is aged ≥ 18 and ≤ 45 years and in good health."@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_communication a cohsi:Variable ;
skos:altLabel "Subject is able to communicate well with the investigator and is available to attend all study visits"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_communication" ;
skos:prefLabel "Inclusion criterium 3: Subject is able to communicate well with the investigator and is available to attend all study visits."@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_contraception a cohsi:Variable ;
skos:altLabel "Subject agrees to use adequate contraception and not to breastfeed for the duration of the study"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_contraception" ;
skos:prefLabel "Inclusion criterium 5: Subject agrees to use adequate contraception and not to breastfeed for the duration of the study."@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_ok a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_ok" ;
skos:prefLabel "Subject meets all inclusion criteria"@en ;
cohsi:fairCore true ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Incl_understanding a cohsi:Variable ;
skos:altLabel "Subject has adequate understanding of the procedures of the study and agrees to abide strictly thereby"@en ;
skos:closeMatch obo:NCIT_C25532 ;
skos:notation "Incl_understanding" ;
skos:prefLabel "Inclusion criterium 2: Subject has adequate understanding of the procedures of the study and agrees to abide strictly thereby."@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Included a cohsi:Variable ;
skos:notation "Included" ;
skos:prefLabel "Subject included in the study"@en ;
cohsi:fairCore true ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:InclusionStudy a cohsi:Variable ;
skos:notation "InclusionStudy" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "InclusionStudy"@en ;
cohsi:fairCore false .
var:InclusionStudy_female a cohsi:Variable ;
skos:notation "InclusionStudy_female" ;
skos:prefLabel "Possible to include in study?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:InclusionStudy_male a cohsi:Variable ;
skos:notation "InclusionStudy_male" ;
skos:prefLabel "Possible to include in study?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:Leukocytes a cohsi:Variable ;
skos:altLabel "Leukocytes"@en ;
skos:closeMatch loinc:6690-2 ;
skos:exactMatch obo:NCIT_C51948 ;
skos:notation "Leukocytes" ;
skos:prefLabel "Leukocytes (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:Lymphocytes a cohsi:Variable ;
skos:altLabel "Lymphocytes"@en ;
skos:closeMatch loinc:731-0 ;
skos:exactMatch obo:NCIT_C51949 ;
skos:notation "Lymphocytes" ;
skos:prefLabel "Lymphocytes (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:MCV a cohsi:Variable ;
skos:altLabel "MCV"@en ;
skos:closeMatch loinc:787-2 ;
skos:exactMatch obo:NCIT_C64799 ;
skos:notation "MCV" ;
skos:prefLabel "MCV (fL)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000104 ;
cohsi:unitUCUM "fL" .
var:Microscope_cerc1 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_cerc1" ;
skos:prefLabel "# whole cercariae"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_cerc2 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_cerc2" ;
skos:prefLabel "# whole cercariae"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_cerc3 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_cerc3" ;
skos:prefLabel "# whole cercariae"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_cerctotal a cohsi:Variable ;
skos:altLabel "# whole cercaria total"@en ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_cerctotal" ;
skos:prefLabel "Microscopy of water after challenge: total number of whole cercariae "@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_heads1 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_heads1" ;
skos:prefLabel "# heads"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_heads2 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_heads2" ;
skos:prefLabel "# heads"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_heads3 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_heads3" ;
skos:prefLabel "# heads"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_headstotal a cohsi:Variable ;
skos:altLabel "# heads total"@en ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_headstotal" ;
skos:prefLabel "Microscopy of water after challenge: total number of heads "@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_tails1 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_tails1" ;
skos:prefLabel "# tails"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_tails2 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_tails2" ;
skos:prefLabel "# tails"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_tails3 a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_tails3" ;
skos:prefLabel "# tails"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Microscope_tailstotal a cohsi:Variable ;
skos:altLabel "# tails total"@en ;
skos:closeMatch obo:NCIT_C16853 ;
skos:notation "Microscope_tailstotal" ;
skos:prefLabel "Microscopy of water after challenge: total number of tails"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "CoHSI" ;
cohsi:unit obo:UO_0000189 ;
cohsi:unitUCUM "{count}" .
var:Missing a cohsi:Variable ;
skos:notation "Missing" ;
skos:prefLabel "Missing timepoints due to holidays?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:Missing_Timepoints a cohsi:Variable ;
skos:notation "Missing_Timepoints" ;
skos:prefLabel "Which timepoints? Please note date and weeks."@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:Monocytes a cohsi:Variable ;
skos:altLabel "Monocytes"@en ;
skos:closeMatch loinc:742-7 ;
skos:exactMatch obo:NCIT_C64823 ;
skos:notation "Monocytes" ;
skos:prefLabel "Monocytes (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:Naso_CDate a cohsi:Variable ;
skos:notation "Naso_CDate" ;
skos:prefLabel "Nasosorption collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Naso_CTime a cohsi:Variable ;
skos:notation "Naso_CTime" ;
skos:prefLabel "Nasosorption collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Naso_FTime a cohsi:Variable ;
skos:notation "Naso_FTime" ;
skos:prefLabel "Nasosorption freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Naso_nose a cohsi:Variable ;
skos:notation "Naso_nose" ;
skos:prefLabel "Nasosorption - which nose"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Left_right .
var:Neutrophils a cohsi:Variable ;
skos:altLabel "Neutrophils"@en ;
skos:closeMatch loinc:751-8 ;
skos:exactMatch obo:NCIT_C51950 ;
skos:notation "Neutrophils" ;
skos:prefLabel "Neutrophils (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:PAXgene_FTime a cohsi:Variable ;
skos:notation "PAXgene_FTime" ;
skos:prefLabel "PAXgene freezer date/time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "datetime" ;
cohsi:form "week X" .
var:PBMC_CDate a cohsi:Variable ;
skos:notation "PBMC_CDate" ;
skos:prefLabel "PBMC collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:PE_Date a cohsi:Variable ;
skos:notation "PE_Date" ;
skos:prefLabel "Date of examination"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "Physical examination" .
var:PE_Temperature a cohsi:Variable ;
skos:closeMatch loinc:8310-5 ;
skos:exactMatch obo:NCIT_C174446 ;
skos:notation "PE_Temperature" ;
skos:prefLabel "Temperature"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Physical examination" ;
cohsi:unit obo:UO_0000027 ;
cohsi:unitUCUM "Cel" .
var:People a cohsi:Variable ;
skos:notation "People" ;
skos:prefLabel "Discussed that more people might be screened and screening not necessarily means inclusion"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:PhysicalExamination a cohsi:Variable ;
skos:closeMatch obo:NCIT_C20989 ;
skos:notation "PhysicalExamination" ;
skos:prefLabel "Physical examination"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Plasma_FTime a cohsi:Variable ;
skos:notation "Plasma_FTime" ;
skos:prefLabel "Plasma freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Potassium a cohsi:Variable ;
skos:altLabel "Potassium"@en ;
skos:closeMatch loinc:2823-3 ;
skos:exactMatch obo:NCIT_C64853 ;
skos:notation "Potassium" ;
skos:prefLabel "Potassium (mmol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:PregnancyTest a cohsi:Variable ;
skos:closeMatch obo:NCIT_C92949 ;
skos:notation "PregnancyTest" ;
skos:prefLabel "Pregnancy test"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Pregnancy_test .
var:Probiotics a cohsi:Variable ;
skos:notation "Probiotics" ;
skos:prefLabel "Use of probiotics?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:ProbioticsExplain a cohsi:Variable ;
skos:notation "ProbioticsExplain" ;
skos:prefLabel "Please explain which probiotics"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "week X" .
var:Pulse a cohsi:Variable ;
skos:closeMatch loinc:8867-4 ;
skos:exactMatch obo:NCIT_C49676 ;
skos:notation "Pulse" ;
skos:prefLabel "Pulse rate"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Physical examination" ;
cohsi:unitUCUM "/min" .
var:Remarks_Sampling a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "Remarks_Sampling" ;
skos:prefLabel "Remarks sampling"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "week X" .
var:Remarks_Visit a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "Remarks_Visit" ;
skos:prefLabel "Remarks visit physician"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "week X" .
var:Remarks_meas a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "Remarks_meas" ;
skos:prefLabel "Remarks measurements"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "week X" .
var:Report_week00 a cohsi:Variable ;
skos:notation "Report_week00" ;
skos:prefLabel "week 00"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week01 a cohsi:Variable ;
skos:notation "Report_week01" ;
skos:prefLabel "week 01"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week02 a cohsi:Variable ;
skos:notation "Report_week02" ;
skos:prefLabel "week 02"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week03 a cohsi:Variable ;
skos:notation "Report_week03" ;
skos:prefLabel "week 03"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week04 a cohsi:Variable ;
skos:notation "Report_week04" ;
skos:prefLabel "week 04"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week05 a cohsi:Variable ;
skos:notation "Report_week05" ;
skos:prefLabel "week 05"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week06 a cohsi:Variable ;
skos:notation "Report_week06" ;
skos:prefLabel "week 06"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week07 a cohsi:Variable ;
skos:notation "Report_week07" ;
skos:prefLabel "week 07"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week08 a cohsi:Variable ;
skos:notation "Report_week08" ;
skos:prefLabel "week 08"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week09 a cohsi:Variable ;
skos:notation "Report_week09" ;
skos:prefLabel "week 09"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week10 a cohsi:Variable ;
skos:notation "Report_week10" ;
skos:prefLabel "week 10"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week11 a cohsi:Variable ;
skos:notation "Report_week11" ;
skos:prefLabel "week 11"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week12 a cohsi:Variable ;
skos:notation "Report_week12" ;
skos:prefLabel "week 12"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week13 a cohsi:Variable ;
skos:notation "Report_week13" ;
skos:prefLabel "week 13"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week14 a cohsi:Variable ;
skos:notation "Report_week14" ;
skos:prefLabel "week 14"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week15 a cohsi:Variable ;
skos:notation "Report_week15" ;
skos:prefLabel "week 15"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week16 a cohsi:Variable ;
skos:notation "Report_week16" ;
skos:prefLabel "week 16"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week18 a cohsi:Variable ;
skos:notation "Report_week18" ;
skos:prefLabel "week 18"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week20 a cohsi:Variable ;
skos:notation "Report_week20" ;
skos:prefLabel "week 20"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:Report_week52 a cohsi:Variable ;
skos:notation "Report_week52" ;
skos:prefLabel "week 52"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Study: Week 00-52" ;
cohsi:optionGroup cl:Yes_Missing .
var:SCAA_calc a cohsi:Variable ;
skos:notation "SCAA_calc" ;
skos:prefLabel "SCAA pos/neg calculation"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:SCAA_date a cohsi:Variable ;
skos:notation "SCAA_date" ;
skos:prefLabel "SCAA measurement date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:SCAA_initials a cohsi:Variable ;
skos:notation "SCAA_initials" ;
skos:prefLabel "SCAA measured by (initials)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "week X" .
var:SCAA_posneg a cohsi:Variable ;
skos:altLabel "SCAA pos/neg"@en ;
skos:notation "SCAA_posneg" ;
skos:prefLabel "Serum CAA positive/negative"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Pos_Neg .
var:SCAA_value a cohsi:Variable ;
skos:altLabel "SCAA value (pg/ml)"@en ;
skos:closeMatch obo:NCIT_C268 ;
skos:notation "SCAA_value" ;
skos:prefLabel "Serum CAA value (pg/ml)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0010070 ;
cohsi:unitUCUM "pg/mL" .
var:Safety_labs a cohsi:Variable ;
skos:notation "Safety_labs" ;
skos:prefLabel "Safety labs taken?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Yes_No .
var:Schisto_PCR a cohsi:Variable ;
skos:closeMatch obo:NCIT_C17003 ;
skos:notation "Schisto_PCR" ;
skos:prefLabel "Schisto: PCR on feces"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Pos_Neg .
var:Selection a cohsi:Variable ;
skos:notation "Selection" ;
skos:prefLabel "Selection for CoHSI"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Selection .
var:Serum_CDate a cohsi:Variable ;
skos:notation "Serum_CDate" ;
skos:prefLabel "Serum collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Serum_CTime a cohsi:Variable ;
skos:notation "Serum_CTime" ;
skos:prefLabel "Serum collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Serum_FTime a cohsi:Variable ;
skos:notation "Serum_FTime" ;
skos:prefLabel "Serum freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Signs_Cardiovascular a cohsi:Variable ;
skos:notation "Signs_Cardiovascular" ;
skos:prefLabel "Signs involving cardio-vascular system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Cardiovascular_ClinSig a cohsi:Variable ;
skos:notation "Signs_Cardiovascular_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Cardiovascular_specify a cohsi:Variable ;
skos:notation "Signs_Cardiovascular_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Digestive a cohsi:Variable ;
skos:notation "Signs_Digestive" ;
skos:prefLabel "Signs involving digestive system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Digestive_ClinSig a cohsi:Variable ;
skos:notation "Signs_Digestive_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Digestive_specify a cohsi:Variable ;
skos:notation "Signs_Digestive_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_GenitoUrinary a cohsi:Variable ;
skos:notation "Signs_GenitoUrinary" ;
skos:prefLabel "Signs involving genito-urinary system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_GenitoUrinary_ClinSig a cohsi:Variable ;
skos:notation "Signs_GenitoUrinary_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_GenitoUrinary_specify a cohsi:Variable ;
skos:notation "Signs_GenitoUrinary_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Lymphatic a cohsi:Variable ;
skos:notation "Signs_Lymphatic" ;
skos:prefLabel "Signs involving lymphatic system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Lymphatic_ClinSig a cohsi:Variable ;
skos:notation "Signs_Lymphatic_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Lymphatic_specify a cohsi:Variable ;
skos:notation "Signs_Lymphatic_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Neurological a cohsi:Variable ;
skos:notation "Signs_Neurological" ;
skos:prefLabel "Signs involving neurological system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Neurological_ClinSig a cohsi:Variable ;
skos:notation "Signs_Neurological_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Neurological_specify a cohsi:Variable ;
skos:notation "Signs_Neurological_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Other a cohsi:Variable ;
skos:notation "Signs_Other" ;
skos:prefLabel "Signs involving other system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Other_ClinSig a cohsi:Variable ;
skos:notation "Signs_Other_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Other_specify a cohsi:Variable ;
skos:notation "Signs_Other_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Respiratory a cohsi:Variable ;
skos:notation "Signs_Respiratory" ;
skos:prefLabel "Signs involving respiratory system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Respiratory_ClinSig a cohsi:Variable ;
skos:notation "Signs_Respiratory_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Respiratory_specify a cohsi:Variable ;
skos:notation "Signs_Respiratory_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Skeleton a cohsi:Variable ;
skos:notation "Signs_Skeleton" ;
skos:prefLabel "Signs involving skeleton?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Skeleton_ClinSig a cohsi:Variable ;
skos:notation "Signs_Skeleton_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Skeleton_specify a cohsi:Variable ;
skos:notation "Signs_Skeleton_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Signs_Skin a cohsi:Variable ;
skos:notation "Signs_Skin" ;
skos:prefLabel "Signs involving skin?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Skin_ClinSig a cohsi:Variable ;
skos:notation "Signs_Skin_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Physical examination" ;
cohsi:optionGroup cl:Yes_No .
var:Signs_Skin_specify a cohsi:Variable ;
skos:notation "Signs_Skin_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Physical examination" .
var:Sodium a cohsi:Variable ;
skos:altLabel "Sodium"@en ;
skos:closeMatch loinc:2951-2 ;
skos:exactMatch obo:NCIT_C64809 ;
skos:notation "Sodium" ;
skos:prefLabel "Sodium (mmol/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:T_AL a cohsi:Variable ;
skos:altLabel "Remarks on AL"@en ;
skos:notation "T_AL" ;
skos:prefLabel "Treatment with arthemether/lumefantrine, remarks"@en ;
cohsi:fairCore true ;
cohsi:fieldType "textarea" ;
cohsi:form "Treatment" .
var:T_DAF a cohsi:Variable ;
skos:notation "T_DAF" ;
skos:prefLabel "Filled in drug accountability form (iProva)?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Treatment" ;
cohsi:optionGroup cl:Yes_No .
var:T_Date a cohsi:Variable ;
skos:altLabel "Date of treatment"@en ;
skos:notation "T_Date" ;
skos:prefLabel "Treatment date"@en ;
cohsi:fairCore true ;
cohsi:fieldType "date" ;
cohsi:form "Treatment" .
var:T_Medication a cohsi:Variable ;
skos:altLabel "Treatment with:"@en ;
skos:notation "T_Medication" ;
skos:prefLabel "Treatment medication"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Treatment" ;
cohsi:optionGroup cl:Treatment .
var:T_PZQ a cohsi:Variable ;
skos:altLabel "Dosing schedule praziquantel"@en ;
skos:notation "T_PZQ" ;
skos:prefLabel "Treatment with praziquantel, dosing schedule"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Treatment" ;
cohsi:optionGroup cl:PZQ_dosing_schedule .
var:T_Remarks a cohsi:Variable ;
skos:altLabel "Remarks treatment"@en ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "T_Remarks" ;
skos:prefLabel "Treatment remarks"@en ;
cohsi:fairCore true ;
cohsi:fieldType "textarea" ;
cohsi:form "Treatment" .
var:T_Tablets a cohsi:Variable ;
skos:notation "T_Tablets" ;
skos:prefLabel "Tablets based on weight (600 mg each)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Treatment" ;
cohsi:optionGroup cl:PZQ_60_mg_kg .
var:T_Visit a cohsi:Variable ;
skos:notation "T_Visit" ;
skos:prefLabel "Treatment visit"@en ;
cohsi:fairCore true ;
cohsi:fieldType "dropdown" ;
cohsi:form "Treatment" ;
cohsi:optionGroup cl:Visit .
var:T_Visit_Other a cohsi:Variable ;
skos:notation "T_Visit_Other" ;
skos:prefLabel "Treatment visit other"@en ;
cohsi:fairCore true ;
cohsi:form "Treatment" .
var:T_Weight a cohsi:Variable ;
skos:closeMatch loinc:29463-7 ;
skos:exactMatch obo:NCIT_C81328 ;
skos:notation "T_Weight" ;
skos:prefLabel "Weight volunteer"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Treatment" ;
cohsi:unit obo:UO_0000009 ;
cohsi:unitUCUM "kg" .
var:Temperature a cohsi:Variable ;
skos:closeMatch loinc:8310-5 ;
skos:exactMatch obo:NCIT_C174446 ;
skos:notation "Temperature" ;
skos:prefLabel "Temperature"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000027 ;
cohsi:unitUCUM "Cel" .
var:Trombocytes a cohsi:Variable ;
skos:altLabel "Trombocytes"@en ;
skos:closeMatch loinc:777-3 ;
skos:exactMatch obo:NCIT_C51951 ;
skos:notation "Trombocytes" ;
skos:prefLabel "Trombocytes (x10^9/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unitUCUM "10*9/L" .
var:UCAA_calc a cohsi:Variable ;
skos:notation "UCAA_calc" ;
skos:prefLabel "UCAA pos/neg calculation"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:UCAA_date a cohsi:Variable ;
skos:notation "UCAA_date" ;
skos:prefLabel "UCAA measurement date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:UCAA_initials a cohsi:Variable ;
skos:notation "UCAA_initials" ;
skos:prefLabel "UCAA measured by (initials)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "week X" .
var:UCAA_posneg a cohsi:Variable ;
skos:altLabel "UCAA pos/neg"@en ;
skos:notation "UCAA_posneg" ;
skos:prefLabel "Urine CAA positive/negative"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Pos_Neg .
var:UCAA_value a cohsi:Variable ;
skos:altLabel "UCAA value (pg/ml)"@en ;
skos:closeMatch obo:NCIT_C268 ;
skos:notation "UCAA_value" ;
skos:prefLabel "Urine CAA value (pg/ml)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0010070 ;
cohsi:unitUCUM "pg/mL" .
var:Urine_CDate a cohsi:Variable ;
skos:notation "Urine_CDate" ;
skos:prefLabel "Urine collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "week X" .
var:Urine_CTime a cohsi:Variable ;
skos:notation "Urine_CTime" ;
skos:prefLabel "Urine collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Urine_FTime a cohsi:Variable ;
skos:notation "Urine_FTime" ;
skos:prefLabel "Urine freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "week X" .
var:Visit a cohsi:Variable ;
skos:notation "Visit" ;
skos:prefLabel "Visit"@en ;
cohsi:fairCore true ;
cohsi:fieldType "dropdown" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:Visit .
var:Visit_other a cohsi:Variable ;
skos:altLabel "Calulation week"@en ;
skos:notation "Visit_other" ;
skos:prefLabel "Visit other"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:Visit_reason a cohsi:Variable ;
skos:notation "Visit_reason" ;
skos:prefLabel "Reason visit other"@en ;
cohsi:fairCore true ;
cohsi:fieldType "textarea" ;
cohsi:form "week X" .
var:Worm_IFA a cohsi:Variable ;
skos:altLabel "Schisto: IFA worm"@en ;
skos:closeMatch obo:NCIT_C17370 ;
skos:notation "Worm_IFA" ;
skos:prefLabel "Schistosomiasis: IFA worm (IgM)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:IFA_worm .
var:calc_CBC a cohsi:Variable ;
skos:notation "calc_CBC" ;
skos:prefLabel "CALC CBC (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_CBC_female a cohsi:Variable ;
skos:notation "calc_CBC_female" ;
skos:prefLabel "CALC CBC female (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_CBC_male a cohsi:Variable ;
skos:notation "calc_CBC_male" ;
skos:prefLabel "CALC CBC male (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_Eos a cohsi:Variable ;
skos:notation "calc_Eos" ;
skos:prefLabel "CALC eos (week 00,02,04,05,06,07,08,10,12,14,16,18,20,52 )"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_Feces a cohsi:Variable ;
skos:notation "calc_Feces" ;
skos:prefLabel "CALC Feces sampling (wk 0,4,8,12,(16),20,52)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_KCL a cohsi:Variable ;
skos:notation "calc_KCL" ;
skos:prefLabel "CALC KCL (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_KCL_female a cohsi:Variable ;
skos:notation "calc_KCL_female" ;
skos:prefLabel "CALC KCL female (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_KCL_male a cohsi:Variable ;
skos:notation "calc_KCL_male" ;
skos:prefLabel "CALC KCL male (week 00,08)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_Measurements a cohsi:Variable ;
skos:notation "calc_Measurements" ;
skos:prefLabel "CALC Measurements (NOT week 01,03,09,11,13,15)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_PBMC a cohsi:Variable ;
skos:notation "calc_PBMC" ;
skos:prefLabel "CALC PBMC (week 0,4,8,12,16,20,24,52)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_PhysicalExamination a cohsi:Variable ;
skos:notation "calc_PhysicalExamination" ;
skos:prefLabel "CALC Physical examination (week 00)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_PregnancyTest a cohsi:Variable ;
skos:notation "calc_PregnancyTest" ;
skos:prefLabel "CALC Pregnancy test (week 00)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_SchistoELISA a cohsi:Variable ;
skos:notation "calc_SchistoELISA" ;
skos:prefLabel "CALC Schisto ELISA (wk 04, 08, 12, 16, 20, 52)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_SchistoIFA a cohsi:Variable ;
skos:notation "calc_SchistoIFA" ;
skos:prefLabel "CALC Schisto IFA (wk 04-08, 12, 16, 20, 52)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_Treatment a cohsi:Variable ;
skos:notation "calc_Treatment" ;
skos:prefLabel "CALC Treatment (week 08,12,other)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:calc_naso a cohsi:Variable ;
skos:notation "calc_naso" ;
skos:prefLabel "CALC Nasosorption (week 0-8)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" .
var:gGT a cohsi:Variable ;
skos:altLabel "Gamma GT"@en ;
skos:closeMatch loinc:2324-2 ;
skos:exactMatch obo:NCIT_C64847 ;
skos:notation "gGT" ;
skos:prefLabel "Gamma-glutamyl transferase (U/L)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:gGT_female a cohsi:Variable ;
skos:closeMatch loinc:2324-2 ;
skos:exactMatch obo:NCIT_C64847 ;
skos:notation "gGT_female" ;
skos:prefLabel "Gamma GT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:gGT_male a cohsi:Variable ;
skos:closeMatch loinc:2324-2 ;
skos:exactMatch obo:NCIT_C64847 ;
skos:notation "gGT_male" ;
skos:prefLabel "Gamma GT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "week X" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:scr_Age a cohsi:Variable ;
skos:closeMatch loinc:30525-0 ;
skos:exactMatch obo:NCIT_C25150 ;
skos:notation "scr_Age" ;
skos:prefLabel "Age in years (at week 00)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000036 ;
cohsi:unitUCUM "a" .
var:scr_BMI a cohsi:Variable ;
skos:altLabel "BMI"@en ;
skos:closeMatch loinc:39156-5 ;
skos:exactMatch obo:NCIT_C16358 ;
skos:notation "scr_BMI" ;
skos:prefLabel "BMI at screening (kg/m^2)"@en ;
cohsi:fairCore true ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000086 ;
cohsi:unitUCUM "kg/m2" .
var:scr_BP_diasystolic a cohsi:Variable ;
skos:closeMatch loinc:8462-4 ;
skos:exactMatch obo:NCIT_C25299 ;
skos:notation "scr_BP_diasystolic" ;
skos:prefLabel "Diastolic blood pressure"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000272 ;
cohsi:unitUCUM "mm[Hg]" .
var:scr_BP_systolic a cohsi:Variable ;
skos:closeMatch loinc:8480-6 ;
skos:exactMatch obo:NCIT_C25298 ;
skos:notation "scr_BP_systolic" ;
skos:prefLabel "Systolic blood pressure"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000272 ;
cohsi:unitUCUM "mm[Hg]" .
var:scr_Blood_donor a cohsi:Variable ;
skos:notation "scr_Blood_donor" ;
skos:prefLabel "Blood donor (Sanquin or other)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Blood_refrain a cohsi:Variable ;
skos:notation "scr_Blood_refrain" ;
skos:prefLabel "Agrees to refrain from blood donation"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Breastfeeding a cohsi:Variable ;
skos:notation "scr_Breastfeeding" ;
skos:prefLabel "No breastfeeding for the duration of the study"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Allergies a cohsi:Variable ;
skos:notation "scr_Condition_Allergies" ;
skos:prefLabel "Condition involving allergies?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Allergies_code a cohsi:Variable ;
skos:notation "scr_Condition_Allergies_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Allergies_description a cohsi:Variable ;
skos:notation "scr_Condition_Allergies_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Allergies_time a cohsi:Variable ;
skos:notation "scr_Condition_Allergies_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Cardiovascular a cohsi:Variable ;
skos:notation "scr_Condition_Cardiovascular" ;
skos:prefLabel "Condition involving cardio-vascular system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Cardiovascular_code a cohsi:Variable ;
skos:notation "scr_Condition_Cardiovascular_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Cardiovascular_description a cohsi:Variable ;
skos:notation "scr_Condition_Cardiovascular_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Cardiovascular_time a cohsi:Variable ;
skos:notation "scr_Condition_Cardiovascular_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Digestive a cohsi:Variable ;
skos:notation "scr_Condition_Digestive" ;
skos:prefLabel "Condition involving digestive system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Digestive_code a cohsi:Variable ;
skos:notation "scr_Condition_Digestive_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Digestive_description a cohsi:Variable ;
skos:notation "scr_Condition_Digestive_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Digestive_time a cohsi:Variable ;
skos:notation "scr_Condition_Digestive_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_EarNoseThroat a cohsi:Variable ;
skos:notation "scr_Condition_EarNoseThroat" ;
skos:prefLabel "Condition involving ear-nose-throat?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_EarNoseThroat_code a cohsi:Variable ;
skos:notation "scr_Condition_EarNoseThroat_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_EarNoseThroat_description a cohsi:Variable ;
skos:notation "scr_Condition_EarNoseThroat_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_EarNoseThroat_time a cohsi:Variable ;
skos:notation "scr_Condition_EarNoseThroat_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Endocrine a cohsi:Variable ;
skos:notation "scr_Condition_Endocrine" ;
skos:prefLabel "Condition involving endocrine system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Endocrine_code a cohsi:Variable ;
skos:notation "scr_Condition_Endocrine_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Endocrine_description a cohsi:Variable ;
skos:notation "scr_Condition_Endocrine_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Endocrine_time a cohsi:Variable ;
skos:notation "scr_Condition_Endocrine_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Eyes a cohsi:Variable ;
skos:notation "scr_Condition_Eyes" ;
skos:prefLabel "Condition involving eyes?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Eyes_code a cohsi:Variable ;
skos:notation "scr_Condition_Eyes_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Eyes_description a cohsi:Variable ;
skos:notation "scr_Condition_Eyes_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Eyes_time a cohsi:Variable ;
skos:notation "scr_Condition_Eyes_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_GenitoUrinary a cohsi:Variable ;
skos:notation "scr_Condition_GenitoUrinary" ;
skos:prefLabel "Condition involving genito-urinary system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_GenitoUrinary_code a cohsi:Variable ;
skos:notation "scr_Condition_GenitoUrinary_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_GenitoUrinary_description a cohsi:Variable ;
skos:notation "scr_Condition_GenitoUrinary_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_GenitoUrinary_time a cohsi:Variable ;
skos:notation "scr_Condition_GenitoUrinary_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Haematology a cohsi:Variable ;
skos:notation "scr_Condition_Haematology" ;
skos:prefLabel "Condition involving haematology?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Haematology_code a cohsi:Variable ;
skos:notation "scr_Condition_Haematology_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Haematology_description a cohsi:Variable ;
skos:notation "scr_Condition_Haematology_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Haematology_time a cohsi:Variable ;
skos:notation "scr_Condition_Haematology_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Neurological a cohsi:Variable ;
skos:notation "scr_Condition_Neurological" ;
skos:prefLabel "Condition involving neurological system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Neurological_code a cohsi:Variable ;
skos:notation "scr_Condition_Neurological_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Neurological_description a cohsi:Variable ;
skos:notation "scr_Condition_Neurological_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Neurological_time a cohsi:Variable ;
skos:notation "scr_Condition_Neurological_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Other a cohsi:Variable ;
skos:notation "scr_Condition_Other" ;
skos:prefLabel "Condition involving other system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Other_code a cohsi:Variable ;
skos:notation "scr_Condition_Other_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Other_description a cohsi:Variable ;
skos:notation "scr_Condition_Other_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Other_time a cohsi:Variable ;
skos:notation "scr_Condition_Other_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Respiratory a cohsi:Variable ;
skos:notation "scr_Condition_Respiratory" ;
skos:prefLabel "Condition involving respiratory system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Respiratory_code a cohsi:Variable ;
skos:notation "scr_Condition_Respiratory_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Respiratory_description a cohsi:Variable ;
skos:notation "scr_Condition_Respiratory_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Respiratory_time a cohsi:Variable ;
skos:notation "scr_Condition_Respiratory_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Skeleton a cohsi:Variable ;
skos:notation "scr_Condition_Skeleton" ;
skos:prefLabel "Condition involving skeleton?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Skeleton_code a cohsi:Variable ;
skos:notation "scr_Condition_Skeleton_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Skeleton_description a cohsi:Variable ;
skos:notation "scr_Condition_Skeleton_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Skeleton_time a cohsi:Variable ;
skos:notation "scr_Condition_Skeleton_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Condition_Skin a cohsi:Variable ;
skos:notation "scr_Condition_Skin" ;
skos:prefLabel "Condition involving the skin?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Condition_Skin_code a cohsi:Variable ;
skos:notation "scr_Condition_Skin_code" ;
skos:prefLabel "ICD-10 code"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Skin_description a cohsi:Variable ;
skos:notation "scr_Condition_Skin_description" ;
skos:prefLabel "ICD-10 description"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Condition_Skin_time a cohsi:Variable ;
skos:notation "scr_Condition_Skin_time" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Contraception a cohsi:Variable ;
skos:notation "scr_Contraception" ;
skos:prefLabel "Use adequate contraception for the duration of the study"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Date a cohsi:Variable ;
skos:notation "scr_Date" ;
skos:prefLabel "Date of screening"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "Screening" .
var:scr_Drugs a cohsi:Variable ;
skos:notation "scr_Drugs" ;
skos:prefLabel "Drug use"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Drugs_frequency_month a cohsi:Variable ;
skos:notation "scr_Drugs_frequency_month" ;
skos:prefLabel "Frequency of drug use?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "per month" .
var:scr_Drugs_other a cohsi:Variable ;
skos:notation "scr_Drugs_other" ;
skos:prefLabel "Which other drugs?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Drugs_which.amphetamins_XTC a cohsi:Variable ;
skos:broader var:scr_Drugs_which ;
skos:notation "scr_Drugs_which#amphetamins__XTC" ;
skos:prefLabel "Which drugs?: amphetamins XTC"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Drugs_which.cocaine a cohsi:Variable ;
skos:broader var:scr_Drugs_which ;
skos:notation "scr_Drugs_which#cocaine" ;
skos:prefLabel "Which drugs?: cocaine"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Drugs_which.marijuana a cohsi:Variable ;
skos:broader var:scr_Drugs_which ;
skos:notation "scr_Drugs_which#marijuana" ;
skos:prefLabel "Which drugs?: marijuana"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Drugs_which.other a cohsi:Variable ;
skos:broader var:scr_Drugs_which ;
skos:notation "scr_Drugs_which#other" ;
skos:prefLabel "Which drugs?: other"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Employee a cohsi:Variable ;
skos:notation "scr_Employee" ;
skos:prefLabel "Employee or student of the department of PARA or INZI of the LUMC"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Europe a cohsi:Variable ;
skos:notation "scr_Europe" ;
skos:prefLabel "Remain in Europe (excluding Corsica) during the study period"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Examination_desciption a cohsi:Variable ;
skos:notation "scr_Examination_desciption" ;
skos:prefLabel "Description physical examination"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Examination_signs a cohsi:Variable ;
skos:closeMatch obo:NCIT_C20989 ;
skos:notation "scr_Examination_signs" ;
skos:prefLabel "Any signs during physical examination?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_FamilyHistory a cohsi:Variable ;
skos:notation "scr_FamilyHistory" ;
skos:prefLabel "Family history"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Gender a cohsi:Variable ;
skos:exactMatch obo:NCIT_C17357 ;
skos:notation "scr_Gender" ;
skos:prefLabel "Gender"@en ;
cohsi:fairCore true ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Gender .
var:scr_Height a cohsi:Variable ;
skos:closeMatch loinc:8302-2 ;
skos:exactMatch obo:NCIT_C164634 ;
skos:notation "scr_Height" ;
skos:prefLabel "Height"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000015 ;
cohsi:unitUCUM "cm" .
var:scr_ICF_data a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16735 ;
skos:notation "scr_ICF_data" ;
skos:prefLabel "ICF \"toestemming om mijn persoonsgegevens langer na dit onderzoek te bewaren en te gebruiken voor toekomstig onderzoek op het gebied van schistosomiasis, zoals in de informatiebrief staat\""@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_ICF_material a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16735 ;
skos:notation "scr_ICF_material" ;
skos:prefLabel "ICF \"toestemming om mijn lichaamsmateriaal na dit onderzoek te bewaren en om dit later nog voor meer onderzoek op het gebied van schistosomiasis te gebruiken, zoals in de informatiebrief staat\""@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_ICF_research a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16735 ;
skos:notation "scr_ICF_research" ;
skos:prefLabel "ICF \"toestemming om mij na dit onderzoek opnieuw te benaderen voor een vervolgonderzoek\""@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_ICF_share a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16735 ;
skos:notation "scr_ICF_share" ;
skos:prefLabel "ICF \"toestemming om mijn persoonsgegevens en lichaamsmateriaal de delen met partner onderzoeksinstituten die zich buiten de EU bevinden\""@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_ICF_signed a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16735 ;
skos:notation "scr_ICF_signed" ;
skos:prefLabel "Has patient signed informed consent?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_MedicalHistory a cohsi:Variable ;
skos:notation "scr_MedicalHistory" ;
skos:prefLabel "Medical history"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Medication a cohsi:Variable ;
skos:notation "scr_Medication" ;
skos:prefLabel "Use of medication"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Medication_specify a cohsi:Variable ;
skos:notation "scr_Medication_specify" ;
skos:prefLabel "Specify medication (dose & indication)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_PreexistingConditions a cohsi:Variable ;
skos:closeMatch obo:NCIT_C54056 ;
skos:notation "scr_PreexistingConditions" ;
skos:prefLabel "Any pre-existing conditions?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Pregnant a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25742 ;
skos:notation "scr_Pregnant" ;
skos:prefLabel "Is volunteer pregnant (self-reported)?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Probiotics a cohsi:Variable ;
skos:notation "scr_Probiotics" ;
skos:prefLabel "Use of probiotics"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_ProbioticsExplain a cohsi:Variable ;
skos:notation "scr_ProbioticsExplain" ;
skos:prefLabel "Please explain which probiotics and how often"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Pulse a cohsi:Variable ;
skos:closeMatch loinc:8867-4 ;
skos:exactMatch obo:NCIT_C49676 ;
skos:notation "scr_Pulse" ;
skos:prefLabel "Pulse rate"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "/min" .
var:scr_Recruitment.facebook a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#facebook" ;
skos:prefLabel "Recruitment by: facebook"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment.flyer a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#flyer" ;
skos:prefLabel "Recruitment by: flyer"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment.instagram a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#instagram" ;
skos:prefLabel "Recruitment by: instagram"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment.mail_vaccinonderzoek a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#mail_vaccinonderzoek" ;
skos:prefLabel "Recruitment by: mail vaccinonderzoek"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment.other a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#other" ;
skos:prefLabel "Recruitment by: other"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment.poster a cohsi:Variable ;
skos:broader var:scr_Recruitment ;
skos:notation "scr_Recruitment#poster" ;
skos:prefLabel "Recruitment by: poster"@en ;
skos:related ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox option" .
var:scr_Recruitment_other a cohsi:Variable ;
skos:notation "scr_Recruitment_other" ;
skos:prefLabel "Please specify \"other\""@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Remarks a cohsi:Variable ;
skos:closeMatch obo:NCIT_C25393 ;
skos:notation "scr_Remarks" ;
skos:prefLabel "Remarks"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_SchistoHistory a cohsi:Variable ;
skos:notation "scr_SchistoHistory" ;
skos:prefLabel "History of schistosomiasis"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_SchistoTT a cohsi:Variable ;
skos:notation "scr_SchistoTT" ;
skos:prefLabel "Previous treatment for schistosomiasis"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Cardiovascular a cohsi:Variable ;
skos:notation "scr_Signs_Cardiovascular" ;
skos:prefLabel "Signs involving cardio-vascular system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Cardiovascular_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Cardiovascular_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Cardiovascular_specify a cohsi:Variable ;
skos:notation "scr_Signs_Cardiovascular_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Digestive a cohsi:Variable ;
skos:notation "scr_Signs_Digestive" ;
skos:prefLabel "Signs involving digestive system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Digestive_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Digestive_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Digestive_specify a cohsi:Variable ;
skos:notation "scr_Signs_Digestive_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_GenitoUrinary a cohsi:Variable ;
skos:notation "scr_Signs_GenitoUrinary" ;
skos:prefLabel "Signs involving genito-urinary system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_GenitoUrinary_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_GenitoUrinary_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_GenitoUrinary_specify a cohsi:Variable ;
skos:notation "scr_Signs_GenitoUrinary_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Lymphatic a cohsi:Variable ;
skos:notation "scr_Signs_Lymphatic" ;
skos:prefLabel "Signs involving lymphatic system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Lymphatic_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Lymphatic_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Lymphatic_specify a cohsi:Variable ;
skos:notation "scr_Signs_Lymphatic_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Neurological a cohsi:Variable ;
skos:notation "scr_Signs_Neurological" ;
skos:prefLabel "Signs involving neurological system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Neurological_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Neurological_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Neurological_specify a cohsi:Variable ;
skos:notation "scr_Signs_Neurological_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Other a cohsi:Variable ;
skos:notation "scr_Signs_Other" ;
skos:prefLabel "Signs involving other system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Other_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Other_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Other_specify a cohsi:Variable ;
skos:notation "scr_Signs_Other_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Respiratory a cohsi:Variable ;
skos:notation "scr_Signs_Respiratory" ;
skos:prefLabel "Signs involving respiratory system?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Respiratory_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Respiratory_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Respiratory_specify a cohsi:Variable ;
skos:notation "scr_Signs_Respiratory_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Skeleton a cohsi:Variable ;
skos:notation "scr_Signs_Skeleton" ;
skos:prefLabel "Signs involving skeleton?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Skeleton_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Skeleton_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Skeleton_specify a cohsi:Variable ;
skos:notation "scr_Signs_Skeleton_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Signs_Skin a cohsi:Variable ;
skos:notation "scr_Signs_Skin" ;
skos:prefLabel "Signs involving skin?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Skin_ClinSig a cohsi:Variable ;
skos:notation "scr_Signs_Skin_ClinSig" ;
skos:prefLabel "Clinical significance?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Signs_Skin_specify a cohsi:Variable ;
skos:notation "scr_Signs_Skin_specify" ;
skos:prefLabel "Specify signs"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_Smoking a cohsi:Variable ;
skos:closeMatch obo:NCIT_C19796 ;
skos:notation "scr_Smoking" ;
skos:prefLabel "Smoking current"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:smoking .
var:scr_Smoking_daily a cohsi:Variable ;
skos:notation "scr_Smoking_daily" ;
skos:prefLabel "Number of daily cigarettes (on average)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:smoking_amount .
var:scr_Smoking_past a cohsi:Variable ;
skos:notation "scr_Smoking_past" ;
skos:prefLabel "Smoking in the past"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:smoking .
var:scr_Smoking_past_amount a cohsi:Variable ;
skos:notation "scr_Smoking_past_amount" ;
skos:prefLabel "Number of daily cigarettes in past (on average)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:smoking_amount .
var:scr_Smoking_past_quit a cohsi:Variable ;
skos:notation "scr_Smoking_past_quit" ;
skos:prefLabel "Year quit smoking"@en ;
cohsi:fairCore false ;
cohsi:fieldType "year" ;
cohsi:form "Screening" .
var:scr_Smoking_past_start a cohsi:Variable ;
skos:notation "scr_Smoking_past_start" ;
skos:prefLabel "Year start smoking"@en ;
cohsi:fairCore false ;
cohsi:fieldType "year" ;
cohsi:form "Screening" .
var:scr_Smoking_start a cohsi:Variable ;
skos:notation "scr_Smoking_start" ;
skos:prefLabel "Year started smoking"@en ;
cohsi:fairCore false ;
cohsi:fieldType "year" ;
cohsi:form "Screening" .
var:scr_Social a cohsi:Variable ;
skos:notation "scr_Social" ;
skos:prefLabel "Social"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Telephone a cohsi:Variable ;
skos:notation "scr_Telephone" ;
skos:prefLabel "Reachable by mobile telephone from week 3 to week 8 of the study period"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_Temperature a cohsi:Variable ;
skos:closeMatch loinc:8310-5 ;
skos:exactMatch obo:NCIT_C174446 ;
skos:notation "scr_Temperature" ;
skos:prefLabel "Temperature"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000027 ;
cohsi:unitUCUM "Cel" .
var:scr_TropicalVisits a cohsi:Variable ;
skos:notation "scr_TropicalVisits" ;
skos:prefLabel "Tropical visits"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_Weight a cohsi:Variable ;
skos:closeMatch loinc:29463-7 ;
skos:exactMatch obo:NCIT_C81328 ;
skos:notation "scr_Weight" ;
skos:prefLabel "Weight"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000009 ;
cohsi:unitUCUM "kg" .
var:scr_abnormality a cohsi:Variable ;
skos:notation "scr_abnormality" ;
skos:prefLabel "Is there any abnormality of above mentioned lab measurements?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_abnormality_clinrel a cohsi:Variable ;
skos:notation "scr_abnormality_clinrel" ;
skos:prefLabel "Any clinically relevant abnormalities?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Yes_No .
var:scr_abnormality_which a cohsi:Variable ;
skos:notation "scr_abnormality_which" ;
skos:prefLabel "Which lab measurement is abnormal?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "grid" ;
cohsi:form "Screening" .
var:scr_abnormality_which_Abnormality_1_Clinically_relevant a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_1_Clinically_relevant" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 1 Clinically relevant"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_1_Which_measurement a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_1_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 1 Which measurement?"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_2_Clinically_relevant a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_2_Clinically_relevant" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 2 Clinically relevant"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_2_Which_measurement a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_2_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 2 Which measurement?"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_3_Clinically_relevant a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_3_Clinically_relevant" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 3 Clinically relevant"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_3_Which_measurement a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_3_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 3 Which measurement?"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_4_Clinically_relevant a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_4_Clinically_relevant" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 4 Clinically relevant"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_4_Which_measurement a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_4_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 4 Which measurement?"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_5_Clinically_relevant a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_5_Clinically_relevant" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 5 Clinically relevant"@en ;
cohsi:fairCore false .
var:scr_abnormality_which_Abnormality_5_Which_measurement a cohsi:Variable ;
skos:notation "scr_abnormality_which_Abnormality_5_Which_measurement?" ;
skos:note "Column present in the export but not in the variable list."@en ;
skos:prefLabel "scr abnormality which Abnormality 5 Which measurement?"@en ;
cohsi:fairCore false .
var:scr_alat a cohsi:Variable ;
skos:closeMatch loinc:1742-6 ;
skos:exactMatch obo:NCIT_C64433 ;
skos:notation "scr_alat" ;
skos:prefLabel "ALAT"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:scr_alat_female a cohsi:Variable ;
skos:notation "scr_alat_female" ;
skos:prefLabel "ALAT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_alat_male a cohsi:Variable ;
skos:notation "scr_alat_male" ;
skos:prefLabel "ALAT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_amphetamins a cohsi:Variable ;
skos:notation "scr_amphetamins" ;
skos:prefLabel "Urine amphetamins"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pos_Neg .
var:scr_aph a cohsi:Variable ;
skos:closeMatch loinc:6768-6 ;
skos:exactMatch obo:NCIT_C64432 ;
skos:notation "scr_aph" ;
skos:prefLabel "Alkaline phosphatase"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:scr_aph_female a cohsi:Variable ;
skos:notation "scr_aph_female" ;
skos:prefLabel "Alkaline phosphatase (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_aph_male a cohsi:Variable ;
skos:notation "scr_aph_male" ;
skos:prefLabel "Alkaline phosphatase (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_asat a cohsi:Variable ;
skos:closeMatch loinc:1920-8 ;
skos:exactMatch obo:NCIT_C64467 ;
skos:notation "scr_asat" ;
skos:prefLabel "ASAT"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:scr_asat_female a cohsi:Variable ;
skos:notation "scr_asat_female" ;
skos:prefLabel "ASAT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_asat_male a cohsi:Variable ;
skos:notation "scr_asat_male" ;
skos:prefLabel "ASAT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_basophils a cohsi:Variable ;
skos:closeMatch loinc:704-7 ;
skos:notation "scr_basophils" ;
skos:prefLabel "Basophils"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_bilirubin a cohsi:Variable ;
skos:closeMatch loinc:14631-6 ;
skos:exactMatch obo:NCIT_C38037 ;
skos:notation "scr_bilirubin" ;
skos:prefLabel "Bilirubin total"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:scr_bun a cohsi:Variable ;
skos:closeMatch loinc:22664-7 ;
skos:exactMatch obo:NCIT_C61019 ;
skos:notation "scr_bun" ;
skos:prefLabel "BUN"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:scr_cocaine a cohsi:Variable ;
skos:notation "scr_cocaine" ;
skos:prefLabel "Urine cocaine"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pos_Neg .
var:scr_creatinine a cohsi:Variable ;
skos:closeMatch loinc:14682-9 ;
skos:exactMatch obo:NCIT_C64547 ;
skos:notation "scr_creatinine" ;
skos:prefLabel "Creatinine"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000064 ;
cohsi:unitUCUM "umol/L" .
var:scr_creatinine_female a cohsi:Variable ;
skos:notation "scr_creatinine_female" ;
skos:prefLabel "Creatinine (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "umol/L" .
var:scr_creatinine_male a cohsi:Variable ;
skos:notation "scr_creatinine_male" ;
skos:prefLabel "Creatinine (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "umol/L" .
var:scr_elisa a cohsi:Variable ;
skos:closeMatch obo:NCIT_C16553 ;
skos:notation "scr_elisa" ;
skos:prefLabel "ELISA egg"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:ELISA_egg .
var:scr_eosinophils a cohsi:Variable ;
skos:closeMatch loinc:711-2 ;
skos:exactMatch obo:NCIT_C64550 ;
skos:notation "scr_eosinophils" ;
skos:prefLabel "Eosinophils"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_erythrocytes a cohsi:Variable ;
skos:closeMatch loinc:789-8 ;
skos:exactMatch obo:NCIT_C51946 ;
skos:notation "scr_erythrocytes" ;
skos:prefLabel "Erythrocytes"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*12/L" .
var:scr_erythrocytes_female a cohsi:Variable ;
skos:notation "scr_erythrocytes_female" ;
skos:prefLabel "Erythocytes (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "x10^12/L" .
var:scr_erythrocytes_male a cohsi:Variable ;
skos:notation "scr_erythrocytes_male" ;
skos:prefLabel "Erythocytes (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "x10^12/L" .
var:scr_esr a cohsi:Variable ;
skos:closeMatch loinc:30341-2 ;
skos:exactMatch obo:NCIT_C74611 ;
skos:notation "scr_esr" ;
skos:prefLabel "ESR"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mm/h" .
var:scr_esr_female a cohsi:Variable ;
skos:notation "scr_esr_female" ;
skos:prefLabel "ESR (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mm" .
var:scr_esr_male a cohsi:Variable ;
skos:notation "scr_esr_male" ;
skos:prefLabel "ESR (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mm" .
var:scr_ggt a cohsi:Variable ;
skos:closeMatch loinc:2324-2 ;
skos:exactMatch obo:NCIT_C64847 ;
skos:notation "scr_ggt" ;
skos:prefLabel "gGT"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000179 ;
cohsi:unitUCUM "U/L" .
var:scr_ggt_female a cohsi:Variable ;
skos:notation "scr_ggt_female" ;
skos:prefLabel "gGT (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_ggt_male a cohsi:Variable ;
skos:notation "scr_ggt_male" ;
skos:prefLabel "gGT (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "U/L" .
var:scr_glucose a cohsi:Variable ;
skos:closeMatch loinc:14749-6 ;
skos:exactMatch obo:NCIT_C105585 ;
skos:notation "scr_glucose" ;
skos:prefLabel "Glucose (serum, non fasting)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:scr_hbv a cohsi:Variable ;
skos:notation "scr_hbv" ;
skos:prefLabel "Hepatitis B"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pos_Neg .
var:scr_hcv a cohsi:Variable ;
skos:notation "scr_hcv" ;
skos:prefLabel "Hepatitis C"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pos_Neg .
var:scr_hematocrit a cohsi:Variable ;
skos:closeMatch loinc:20570-8 ;
skos:exactMatch obo:NCIT_C64796 ;
skos:notation "scr_hematocrit" ;
skos:prefLabel "Hematocrit"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "L/L" .
var:scr_hematocrit_female a cohsi:Variable ;
skos:notation "scr_hematocrit_female" ;
skos:prefLabel "Hematocrit (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "L/L" .
var:scr_hematocrit_male a cohsi:Variable ;
skos:notation "scr_hematocrit_male" ;
skos:prefLabel "Hematocrit (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "L/L" .
var:scr_hemoglobin a cohsi:Variable ;
skos:closeMatch loinc:59260-0 ;
skos:exactMatch obo:NCIT_C64848 ;
skos:notation "scr_hemoglobin" ;
skos:prefLabel "Hemoglobin"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:scr_hemoglobin_female a cohsi:Variable ;
skos:notation "scr_hemoglobin_female" ;
skos:prefLabel "Hemoglobin (f)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mmol/L" .
var:scr_hemoglobin_male a cohsi:Variable ;
skos:notation "scr_hemoglobin_male" ;
skos:prefLabel "Hemoglobin (m)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mmol/L" .
var:scr_hiv a cohsi:Variable ;
skos:notation "scr_hiv" ;
skos:prefLabel "HIV"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pos_Neg .
var:scr_ifa a cohsi:Variable ;
skos:closeMatch obo:NCIT_C17370 ;
skos:notation "scr_ifa" ;
skos:prefLabel "IFA worm"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:IFA_worm .
var:scr_leukocytes a cohsi:Variable ;
skos:closeMatch loinc:6690-2 ;
skos:exactMatch obo:NCIT_C51948 ;
skos:notation "scr_leukocytes" ;
skos:prefLabel "Leukocytes"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_lymphocytes a cohsi:Variable ;
skos:closeMatch loinc:731-0 ;
skos:exactMatch obo:NCIT_C51949 ;
skos:notation "scr_lymphocytes" ;
skos:prefLabel "Lymphocytes"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_mch a cohsi:Variable ;
skos:notation "scr_mch" ;
skos:prefLabel "MCH"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "fmol" .
var:scr_mchc a cohsi:Variable ;
skos:notation "scr_mchc" ;
skos:prefLabel "MCHC"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "mmol/L" .
var:scr_mcv a cohsi:Variable ;
skos:closeMatch loinc:787-2 ;
skos:exactMatch obo:NCIT_C64799 ;
skos:notation "scr_mcv" ;
skos:prefLabel "MCV"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000104 ;
cohsi:unitUCUM "fL" .
var:scr_monocytes a cohsi:Variable ;
skos:closeMatch loinc:742-7 ;
skos:exactMatch obo:NCIT_C64823 ;
skos:notation "scr_monocytes" ;
skos:prefLabel "Monocytes"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_neutrophils a cohsi:Variable ;
skos:closeMatch loinc:751-8 ;
skos:exactMatch obo:NCIT_C51950 ;
skos:notation "scr_neutrophils" ;
skos:prefLabel "Neutrophils"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_potassium a cohsi:Variable ;
skos:closeMatch loinc:2823-3 ;
skos:exactMatch obo:NCIT_C64853 ;
skos:notation "scr_potassium" ;
skos:prefLabel "Potassium"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:scr_pt a cohsi:Variable ;
skos:closeMatch obo:NCIT_C62656 ;
skos:notation "scr_pt" ;
skos:prefLabel "Pregnancy test"@en ;
cohsi:fairCore false ;
cohsi:fieldType "radio" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Pregnancy_test ;
cohsi:unitUCUM "s" .
var:scr_remarks_meas a cohsi:Variable ;
skos:notation "scr_remarks_meas" ;
skos:prefLabel "Remarks regarding measurements"@en ;
cohsi:fairCore false ;
cohsi:fieldType "textarea" ;
cohsi:form "Screening" .
var:scr_scaa_date a cohsi:Variable ;
skos:notation "scr_scaa_date" ;
skos:prefLabel "SCAA500 measurement date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "Screening" .
var:scr_scaa_initials a cohsi:Variable ;
skos:notation "scr_scaa_initials" ;
skos:prefLabel "SCAA500 measured by (initials)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "string" ;
cohsi:form "Screening" .
var:scr_scaa_negpos a cohsi:Variable ;
skos:notation "scr_scaa_negpos" ;
skos:prefLabel "SCAA500 neg/pos (neg if <0.5 pg/ml)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "calculation" ;
cohsi:form "Screening" .
var:scr_scaa_value a cohsi:Variable ;
skos:closeMatch obo:NCIT_C268 ;
skos:notation "scr_scaa_value" ;
skos:prefLabel "SCAA500 value (pg/ml)"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0010070 ;
cohsi:unitUCUM "pg/mL" .
var:scr_serum_cdate a cohsi:Variable ;
skos:notation "scr_serum_cdate" ;
skos:prefLabel "Serum collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "Screening" .
var:scr_serum_ctime a cohsi:Variable ;
skos:notation "scr_serum_ctime" ;
skos:prefLabel "Serum collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "Screening" .
var:scr_serum_ftime a cohsi:Variable ;
skos:notation "scr_serum_ftime" ;
skos:prefLabel "Serum freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "Screening" .
var:scr_sodium a cohsi:Variable ;
skos:closeMatch loinc:2951-2 ;
skos:exactMatch obo:NCIT_C64809 ;
skos:notation "scr_sodium" ;
skos:prefLabel "Sodium"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unit obo:UO_0000063 ;
cohsi:unitUCUM "mmol/L" .
var:scr_trombocytes a cohsi:Variable ;
skos:closeMatch loinc:777-3 ;
skos:exactMatch obo:NCIT_C51951 ;
skos:notation "scr_trombocytes" ;
skos:prefLabel "Trombocytes"@en ;
cohsi:fairCore false ;
cohsi:fieldType "numeric" ;
cohsi:form "Screening" ;
cohsi:unitUCUM "10*9/L" .
var:scr_urine_cdate a cohsi:Variable ;
skos:notation "scr_urine_cdate" ;
skos:prefLabel "Urine collection date"@en ;
cohsi:fairCore false ;
cohsi:fieldType "date" ;
cohsi:form "Screening" .
var:scr_urine_ctime a cohsi:Variable ;
skos:notation "scr_urine_ctime" ;
skos:prefLabel "Urine collection time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "Screening" .
var:scr_urine_ftime a cohsi:Variable ;
skos:notation "scr_urine_ftime" ;
skos:prefLabel "Urine freezer time"@en ;
cohsi:fairCore false ;
cohsi:fieldType "time" ;
cohsi:form "Screening" .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3344 ;
skos:inScheme cl:AE_solicited ;
skos:notation "1" ;
skos:prefLabel "itching"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C50464 ;
skos:inScheme cl:AE_solicited ;
skos:notation "10" ;
skos:prefLabel "arthralgia"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3279 ;
skos:inScheme cl:AE_solicited ;
skos:notation "11" ;
skos:prefLabel "night sweats"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C41830 ;
skos:inScheme cl:AE_solicited ;
skos:notation "12" ;
skos:prefLabel "back pain"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C2875 ;
skos:inScheme cl:AE_solicited ;
skos:notation "13" ;
skos:prefLabel "anorexia"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3258 ;
skos:inScheme cl:AE_solicited ;
skos:notation "14" ;
skos:prefLabel "nausea"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3442 ;
skos:inScheme cl:AE_solicited ;
skos:notation "15" ;
skos:prefLabel "vomiting"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C26682 ;
skos:inScheme cl:AE_solicited ;
skos:notation "16" ;
skos:prefLabel "abdominal pain"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C2987 ;
skos:inScheme cl:AE_solicited ;
skos:notation "17" ;
skos:prefLabel "diarrhea"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3038 ;
skos:inScheme cl:AE_solicited ;
skos:notation "2" ;
skos:prefLabel "fever (by examination)"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C39594 ;
skos:inScheme cl:AE_solicited ;
skos:notation "3" ;
skos:prefLabel "rash"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3432 ;
skos:inScheme cl:AE_solicited ;
skos:notation "4" ;
skos:prefLabel "urticaria"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C34661 ;
skos:inScheme cl:AE_solicited ;
skos:notation "5" ;
skos:prefLabel "headache"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3036 ;
skos:inScheme cl:AE_solicited ;
skos:notation "6" ;
skos:prefLabel "fatigue"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C3832 ;
skos:inScheme cl:AE_solicited ;
skos:notation "7" ;
skos:prefLabel "malaise"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C37935 ;
skos:inScheme cl:AE_solicited ;
skos:notation "8" ;
skos:prefLabel "coughing"@en .
a skos:Concept ;
skos:exactMatch obo:NCIT_C27009 ;
skos:inScheme cl:AE_solicited ;
skos:notation "9" ;
skos:prefLabel "myalgia"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "1" ;
skos:prefLabel "flyer"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "2" ;
skos:prefLabel "poster"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "3" ;
skos:prefLabel "mail vaccinonderzoek"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "4" ;
skos:prefLabel "facebook"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "5" ;
skos:prefLabel "instagram"@en .
a skos:Concept ;
skos:inScheme cl:Recruitment ;
skos:notation "8" ;
skos:prefLabel "other"@en .
a skos:Concept ;
skos:inScheme cl:drugs ;
skos:notation "1" ;
skos:prefLabel "amphetamins / XTC"@en .
a skos:Concept ;
skos:inScheme cl:drugs ;
skos:notation "2" ;
skos:prefLabel "cocaine"@en .
a skos:Concept ;
skos:inScheme cl:drugs ;
skos:notation "3" ;
skos:prefLabel "marijuana"@en .
a skos:Concept ;
skos:inScheme cl:drugs ;
skos:notation "8" ;
skos:prefLabel "other"@en .
cl:Dose_PZQ a skos:ConceptScheme ;
skos:prefLabel "Dose PZQ"@en .
cl:SCAA_volume a skos:ConceptScheme ;
skos:prefLabel "SCAA volume"@en .
cl:Sediment a skos:ConceptScheme ;
skos:prefLabel "Sediment"@en .
cl:past_current a skos:ConceptScheme ;
skos:prefLabel "past/current"@en .
cl:CM_frequency a skos:ConceptScheme ;
skos:prefLabel "CM frequency"@en .
cl:Gender a skos:ConceptScheme ;
skos:prefLabel "Gender"@en .
cl:Left_right a skos:ConceptScheme ;
skos:prefLabel "Left/right"@en .
cl:PZQ_dosing_schedule a skos:ConceptScheme ;
skos:prefLabel "PZQ dosing schedule"@en .
cl:Pos_Neg_Not_done a skos:ConceptScheme ;
skos:prefLabel "Pos/Neg/Not done"@en .
cl:Treatment a skos:ConceptScheme ;
skos:prefLabel "Treatment"@en .
cl:UCAA_volume a skos:ConceptScheme ;
skos:prefLabel "UCAA volume"@en .
cl:AE_severity a skos:ConceptScheme ;
skos:prefLabel "AE severity"@en .
cl:AE_treatment_required a skos:ConceptScheme ;
skos:prefLabel "AE treatment required"@en .
cl:Group a skos:ConceptScheme ;
skos:prefLabel "Group"@en .
cl:Pregnancy_test a skos:ConceptScheme ;
skos:prefLabel "Pregnancy test"@en .
cl:Selection a skos:ConceptScheme ;
skos:prefLabel "Selection"@en .
var:scr_Drugs_which a cohsi:Variable ;
skos:notation "scr_Drugs_which" ;
skos:prefLabel "Which drugs?"@en ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:drugs .
cl:AE_route a skos:ConceptScheme ;
skos:prefLabel "AE route"@en .
cl:Missing a skos:ConceptScheme ;
skos:prefLabel "Castor missing-value codes"@en .
cl:drugs a skos:ConceptScheme ;
skos:prefLabel "drugs"@en .
cl:ethnicity a skos:ConceptScheme ;
skos:prefLabel "ethnicity"@en .
cl:AE_relationship a skos:ConceptScheme ;
skos:prefLabel "AE relationship"@en .
cl:Cerc a skos:ConceptScheme ;
skos:prefLabel "Cerc"@en .
cl:smoking a skos:ConceptScheme ;
skos:prefLabel "smoking"@en .
cl:smoking_amount a skos:ConceptScheme ;
skos:prefLabel "smoking amount"@en .
var:scr_Recruitment a cohsi:Variable ;
skos:closeMatch obo:NCIT_C78343 ;
skos:notation "scr_Recruitment" ;
skos:prefLabel "Recruitment by"@en ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox" ;
cohsi:form "Screening" ;
cohsi:optionGroup cl:Recruitment .
cl:Diet a skos:ConceptScheme ;
skos:prefLabel "Diet"@en .
cl:Recruitment a skos:ConceptScheme ;
skos:prefLabel "Recruitment"@en .
cl:ELISA_egg a skos:ConceptScheme ;
skos:prefLabel "ELISA egg"@en .
cl:Pos_Neg a skos:ConceptScheme ;
skos:prefLabel "Pos/Neg"@en .
cl:IFA_worm a skos:ConceptScheme ;
skos:prefLabel "IFA worm"@en .
cl:PZQ_60_mg_kg a skos:ConceptScheme ;
skos:prefLabel "PZQ 60 mg/kg"@en .
var:AE_solicited_which a cohsi:Variable ;
skos:closeMatch obo:NCIT_C179175 ;
skos:notation "AE_solicited_which" ;
skos:prefLabel "Solicited adverse events"@en ;
cohsi:fairCore false ;
cohsi:fieldType "checkbox" ;
cohsi:form "week X" ;
cohsi:optionGroup cl:AE_solicited .
cl:AE_solicited a skos:ConceptScheme ;
skos:prefLabel "AE solicited"@en .
cl:Yes_Missing a skos:ConceptScheme ;
skos:prefLabel "Yes/Missing"@en .
cl:Lab_abnormalities a skos:ConceptScheme ;
skos:prefLabel "Lab abnormalities"@en .
cl:Visit a skos:ConceptScheme ;
skos:prefLabel "Visit"@en .
cl:Yes_No a skos:ConceptScheme ;
skos:prefLabel "Yes/No"@en .